RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 NUP133Q8WUM0 1156 aa7.65□□□□□ -1.18
CBX3-206ENST00000481057 RUNDC1Q96C34 613 aa7.65□□□□□ -1.18
CBX3-206ENST00000481057 BBC3Q96PG8 261 aaPredicted RBP7.65□□□□□ -1.18
CBX3-206ENST00000481057 XPNPEP3Q9NQH7 507 aa7.65□□□□□ -1.18
CBX3-206ENST00000481057 KMT5AQ9NQR1 393 aa7.65□□□□□ -1.18
CBX3-206ENST00000481057 FBXO34Q9NWN3 711 aa7.65□□□□□ -1.18
CBX3-206ENST00000481057 LAMA5O15230 3695 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 SALL1Q9NSC2 1324 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 TCRBV7S2A1N4TA0A589 114 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 LEFTY2O00292 366 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 GRM6O15303 877 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 PGK1P00558 417 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 ALAS1P13196 640 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 APOBEC3AP31941 199 aaPredicted RBP7.64□□□□□ -1.19
CBX3-206ENST00000481057 CLCN5P51795 746 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 HK3P52790 923 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 TOB2Q14106 344 aaPredicted RBP7.64□□□□□ -1.19
CBX3-206ENST00000481057 MINDY4Q4G0A6 757 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 CCDC152Q4G0S7 254 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 PABPC1LQ4VXU2 614 aaKnown RBP7.64□□□□□ -1.19
CBX3-206ENST00000481057 TCEAL5Q5H9L2 206 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 N4BP2L1Q5TBK1 243 aaPredicted RBP7.64□□□□□ -1.19
CBX3-206ENST00000481057 SLC4A10Q6U841 1118 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 RNF207Q6ZRF8 634 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 RPAINQ86UA6 219 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 EXTL1Q92935 676 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 MRPL38Q96DV4 380 aaKnown RBP7.64□□□□□ -1.19
CBX3-206ENST00000481057 HIPK3Q9H422 1215 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 MAN1C1Q9NR34 630 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 CHPF2Q9P2E5 772 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 CTNNA3Q9UI47 895 aa7.64□□□□□ -1.19
CBX3-206ENST00000481057 DRGXA6NNA5 263 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 NT5C1B-RDH14C9J2C7 533 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 KIAA0391O15091 583 aaKnown RBP7.63□□□□□ -1.19
CBX3-206ENST00000481057 TRIM24O15164 1050 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 ARIH2O95376 493 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 ALDH2P05091 517 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 HOXC6P09630 235 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 SBK3P0C264 359 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 BUD31P41223 144 aaPredicted RBP7.63□□□□□ -1.19
CBX3-206ENST00000481057 IL12RB1P42701 662 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 CHN2P52757 468 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 ACLYP53396 1101 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 SRSF1Q07955 248 aaKnown RBP eCLIP7.63□□□□□ -1.19
CBX3-206ENST00000481057 UBXN2BQ14CS0 331 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 PRAMEF19Q5SWL8 479 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 DENND1CQ8IV53 801 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 C1orf210Q8IVY1 113 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 CCDC105Q8IYK2 499 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 SUMF1Q8NBK3 374 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 TGS1Q96RS0 853 aaKnown RBP7.63□□□□□ -1.19
CBX3-206ENST00000481057 TMOD2Q9NZR1 351 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 CEP72Q9P209 647 aa7.63□□□□□ -1.19
CBX3-206ENST00000481057 DBF4Q9UBU7 674 aaPredicted RBP7.63□□□□□ -1.19
CBX3-206ENST00000481057 SPTAN1Q13813 2472 aaKnown RBP7.62□□□□□ -1.19
CBX3-206ENST00000481057 TMEM8BA6NDV4 472 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 H3BML4 177 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 HMGB1P09429 215 aaKnown RBP7.62□□□□□ -1.19
CBX3-206ENST00000481057 RARBP10826 455 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 MTHFD1P11586 935 aaKnown RBP7.62□□□□□ -1.19
CBX3-206ENST00000481057 SLC6A2P23975 617 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 SLC6A4P31645 630 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 NHLH2Q02577 135 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 AIMP1Q12904 312 aaKnown RBP7.62□□□□□ -1.19
CBX3-206ENST00000481057 NRN1LQ496H8 165 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 FKBP1CQ5VVH2 108 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 METRNLQ641Q3 311 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 HEATR3Q7Z4Q2 680 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 WDR75Q8IWA0 830 aaKnown RBP7.62□□□□□ -1.19
CBX3-206ENST00000481057 ZBTB34Q8NCN2 500 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 NEU1Q99519 415 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 CGRRF1Q99675 332 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 ACO2Q99798 780 aaKnown RBP7.62□□□□□ -1.19
CBX3-206ENST00000481057 ZNF703Q9H7S9 590 aaPredicted RBP7.62□□□□□ -1.19
CBX3-206ENST00000481057 MIS18AQ9NYP9 233 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.62□□□□□ -1.19
CBX3-206ENST00000481057 EIF2B4Q9UI10 523 aaKnown RBP7.62□□□□□ -1.19
CBX3-206ENST00000481057 PCDHA3Q9Y5H8 950 aa7.62□□□□□ -1.19
CBX3-206ENST00000481057 KRTAP4-8A0A0G2JLE6 195 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 SLC15A5A6NIM6 579 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 F2RL2O00254 374 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 SLC30A4O14863 429 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 NCK2O43639 380 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 HAUS5O94927 633 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 ITGB1P05556 798 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 FTH1P19P0C7X4 201 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 PLA2G2AP14555 144 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 IL1R1P14778 569 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 PTTG1IPP53801 180 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 IRX3P78415 501 aaPredicted RBP7.61□□□□□ -1.19
CBX3-206ENST00000481057 RABL3Q5HYI8 236 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 FAM102AQ5T9C2 384 aaPredicted RBP7.61□□□□□ -1.19
CBX3-206ENST00000481057 MED25Q71SY5 747 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 CAMKK1Q8N5S9 505 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 IL17RDQ8NFM7 739 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 NLGN4YQ8NFZ3 816 aaPredicted RBP7.61□□□□□ -1.19
CBX3-206ENST00000481057 PPP1R35Q8TAP8 253 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 SH3RF3Q8TEJ3 882 aaPredicted RBP7.61□□□□□ -1.19
CBX3-206ENST00000481057 RPGRIP1Q96KN7 1286 aa7.61□□□□□ -1.19
CBX3-206ENST00000481057 FAM167AQ96KS9 214 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms