RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 KCNJ18B7U540 433 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 NT5C1B-RDH14C9J2C7 533 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 C5orf67F2Z3F1 127 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 TMEM189-UBE2V1I3L0A0 370 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 PRRG2O14669 202 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 P4HA2O15460 535 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 DNAJA2O60884 412 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 FGF18O76093 207 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 AFPP02771 609 aaKnown RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 TUBB4AP04350 444 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 ITGB3P05106 788 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 URODP06132 367 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 PGRP06401 933 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 TRIM21P19474 475 aaKnown RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 POLR2BP30876 1174 aaKnown RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 ATICP31939 592 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 SSR1P43307 286 aaKnown RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 TNNT3P45378 269 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 MXI1P50539 228 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 CLCNKBP51801 687 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 GTF2A1P52655 376 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 TNNC1P63316 161 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 MYL7Q01449 175 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 CREMQ03060 361 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 RING1Q06587 406 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 GPM6BQ13491 265 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 KCNJ12Q14500 433 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 NAB2Q15742 525 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 ZBTB6Q15916 424 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 MAN2A1Q16706 1144 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 UPP1Q16831 310 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 FILIP1LQ4L180 1135 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 HABP4Q5JVS0 413 aaKnown RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 C9orf57Q5W0N0 161 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 LMBRD2Q68DH5 695 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 KRT39Q6A163 491 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 KIAA1841Q6NSI8 718 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 TRAPPC11Q7Z392 1133 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 DDX53Q86TM3 631 aaKnown RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 METTL23Q86XA0 190 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 SLC39A11Q8N1S5 342 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 LRRC52Q8N7C0 313 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 CELF2-AS1Q8N7Q2 184 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 AGBL5Q8NDL9 886 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 ZNF397Q8NF99 534 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-209ENST00000479532 TAF4BQ92750 862 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 PPP2R3CQ969Q6 453 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 MRFAP1L1Q96HT8 127 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 IGSF21Q96ID5 467 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 PLCD4Q9BRC7 762 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 C17orf80Q9BSJ5 609 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 FUCA2Q9BTY2 467 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 OSBPL1AQ9BXW6 950 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 WNT10AQ9GZT5 417 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 TNKS2Q9H2K2 1166 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 TMEM8AQ9HCN3 771 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 ENTPD7Q9NQZ7 604 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 CRIM1Q9NZV1 1036 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 GMIPQ9P107 970 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 KLHL3Q9UH77 587 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 DSEQ9UL01 958 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 PLAGL2Q9UPG8 496 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 AGAP1Q9UPQ3 857 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 LZTS1Q9Y250 596 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 CEP290O15078 2479 aa6.6□□□□□ -1.35
SF3B1-209ENST00000479532 COL4A4P53420 1690 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 ANO9A1A5B4 782 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 MEGF11A6BM72 1044 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 H3BNC9 293 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 H7C4K7 107 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 PIRO00625 290 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 SYN3O14994 580 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 HUS1O60921 280 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 SOD2P04179 222 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 TRIM49P0CI25 452 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 TRIM49CP0CI26 452 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 ADH5P11766 374 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 ODC1P11926 461 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 FOSL1P15407 271 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 CASQ1P31415 396 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 PBX3P40426 434 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 GCLMP48507 274 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 GSCP56915 257 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 DLG4P78352 724 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 SOX4Q06945 474 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 GPS2Q13227 327 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 SMC1AQ14683 1233 aaKnown RBP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 SGSM1Q2NKQ1 1148 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 ZNF699Q32M78 642 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 USP41Q3LFD5 358 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 ZACNQ401N2 412 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 TCP11X2Q5H9J9 407 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 TMEM201Q5SNT2 666 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 TEX35Q5T0J7 233 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 FKBP15Q5T1M5 1219 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 ZBTB37Q5TC79 503 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 FUT10Q6P4F1 479 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 CCDC91Q7Z6B0 441 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 CEP57Q86XR8 500 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms