RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 SRSF11Q05519 484 aaKnown RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 LAMTOR4Q0VGL1 99 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 SCRN1Q12765 414 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 CTTNQ14247 550 aaKnown RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 PRSS36Q5K4E3 855 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 LRCH2Q5VUJ6 765 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 TRIM68Q6AZZ1 485 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 LETMD1Q6P1Q0 360 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 CD300LGQ6UXG3 332 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 ACAD11Q709F0 780 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 FKBP9P1Q75LS8 142 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 MTSS1LQ765P7 747 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 MAMDC2Q7Z304 686 aaPredicted RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 LONP2Q86WA8 852 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 NOSTRINQ8IVI9 506 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 CBARPQ8N350 705 aaPredicted RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 IGSF22Q8N9C0 903 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 FANCBQ8NB91 859 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 RNF149Q8NC42 400 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 C2CD4AQ8NCU7 369 aaPredicted RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 EXOC6Q8TAG9 804 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 TNPO1Q92973 898 aaKnown RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 PGBD4Q96DM1 585 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 MBOAT7Q96N66 472 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 MIPEPQ99797 713 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 TRMT61BQ9BVS5 477 aaKnown RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 COLEC11Q9BWP8 271 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 INO80BQ9C086 356 aaPredicted RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 DUSP15Q9H1R2 295 aaPredicted RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 PLEKHA4Q9H4M7 779 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 GFOD1Q9NXC2 390 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 ZDHHC7Q9NXF8 308 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 RGL1Q9NZL6 768 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 VPS54Q9P1Q0 977 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 CEP72Q9P209 647 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 TMEFF2Q9UIK5 374 aaPredicted RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 GDAQ9Y2T3 454 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 FHOD1Q9Y613 1164 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 MUC22E2RYF6 1773 aaPredicted RBP4.34□□□□□ -1.71
COPS7B-220ENST00000479430 NUMA1Q14980 2115 aa4.34□□□□□ -1.71
COPS7B-220ENST00000479430 HELZ2Q9BYK8 2649 aaKnown RBP4.34□□□□□ -1.72
COPS7B-220ENST00000479430 TDRD6O60522 2096 aaKnown RBP4.33□□□□□ -1.72
COPS7B-220ENST00000479430 TSC2P49815 1807 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 IGKV6-21A0A0C4DH24 114 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 E2F8A0AVK6 867 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 LNP1A1A4G5 178 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 GOLGA6CA6NDK9 693 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 GOLGA6BA6NDN3 693 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 OTOL1A6NHN0 477 aaPredicted RBP4.33□□□□□ -1.72
COPS7B-220ENST00000479430 WDR64B1ANS9 1081 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CBX4O00257 560 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CDX4O14627 284 aaPredicted RBP4.33□□□□□ -1.72
COPS7B-220ENST00000479430 PTGESO14684 152 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 SLC27A2O14975 620 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 ZNF263O14978 683 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 TBX3O15119 743 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 NCAM2O15394 837 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 SLC37A4O43826 429 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 ZNF623O75123 536 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 MAFO75444 373 aaPredicted RBP4.33□□□□□ -1.72
COPS7B-220ENST00000479430 ECI2O75521 394 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 TIAF1O95411 115 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CAVIN2O95810 425 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 EGFP01133 1207 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 RPLP2P05387 115 aaKnown RBP4.33□□□□□ -1.72
COPS7B-220ENST00000479430 GOLGA6DP0CG33 693 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CHMLP26374 656 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CCR3P51677 355 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CLDN6P56747 220 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 IL2P60568 153 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 OSTNP61366 133 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 RNF4P78317 190 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CYP4F8P98187 520 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 AMPD2Q01433 879 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 PFKPQ01813 784 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CYP4A11Q02928 519 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 TRAF1Q13077 416 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 SART3Q15020 963 aaKnown RBP4.33□□□□□ -1.72
COPS7B-220ENST00000479430 PCBP2Q15366 365 aaKnown RBP eCLIP4.33□□□□□ -1.721e-6■■■■□ 20.9
COPS7B-220ENST00000479430 ADCK5Q3MIX3 580 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 EEF1DP3Q658K8 133 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 NXNQ6DKJ4 435 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 TMC3Q7Z5M5 1100 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CHD1LQ86WJ1 897 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 SFTPA1Q8IWL2 248 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 TTC9BQ8N6N2 239 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 ZSCAN18Q8TBC5 510 aaPredicted RBP4.33□□□□□ -1.72
COPS7B-220ENST00000479430 RLN3Q8WXF3 142 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CRYGNQ8WXF5 182 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CHFRQ96EP1 664 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 FUBP3Q96I24 572 aaKnown RBP eCLIP4.33□□□□□ -1.72
COPS7B-220ENST00000479430 DYDC2Q96IM9 177 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CEP170P1Q96L14 293 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 AIFM3Q96NN9 605 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 PGLYRP2Q96PD5 576 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 ORAI3Q9BRQ5 295 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 TTPALQ9BTX7 342 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 TEKT3Q9BXF9 490 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 OSBPL6Q9BZF3 934 aa4.33□□□□□ -1.72
COPS7B-220ENST00000479430 CHMP4BQ9H444 224 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms