RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 SENP1Q9P0U3 644 aa14.68□□□□□ -0.06
CCDC78-210ENST00000478979 CPSF3Q9UKF6 684 aaKnown RBP14.68□□□□□ -0.06
CCDC78-210ENST00000478979 C2orf71A6NGG8 1288 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ZBTB42B2RXF5 422 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 M0QYV0 167 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 RARBP10826 455 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 KRT4P19013 534 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ZNF132P52740 706 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 TDRPQ86YL5 185 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ARFGAP1Q8N6T3 406 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 FAM71DQ8N9W8 422 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 SKA1Q96BD8 255 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 NMD3Q96D46 503 aaKnown RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 TRIM55Q9BYV6 548 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 EBF3Q9H4W6 596 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 NDE1Q9NXR1 346 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 AKT3Q9Y243 479 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 MGAMO43451 1857 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 IGKV6D-21A0A0A0MT36 114 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 F5H423 210 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 GPR25O00155 361 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 LRCH4O75427 683 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ITGA2BP08514 1039 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 PABPC4LP0CB38 370 aaKnown RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 GRIA2P42262 883 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 CDKN2BP42772 138 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 SMAD1Q15797 465 aaKnown RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 MSS51Q4VC12 460 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 EAPPQ56P03 285 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ZNF667Q5HYK9 610 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 SCYL2Q6P3W7 929 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ZCCHC9Q8N567 271 aaKnown RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ALLCQ8N6M5 410 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 KCTD6Q8NC69 237 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 SMC1BQ8NDV3 1235 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 PPP2R3CQ969Q6 453 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 PIWIL1Q96J94 861 aaKnown RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 VCPIP1Q96JH7 1222 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 HEXIM2Q96MH2 286 aaKnown RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 TMEM120AQ9BXJ8 343 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 XYLT2Q9H1B5 865 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 RPF1Q9H9Y2 349 aaKnown RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 GPATCH2LQ9NWQ4 482 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ARMCX1Q9P291 453 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 HSFX1Q9UBD0 423 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ERBB2P04626 1255 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ZNF286BP0CG31 522 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 CRABP2P29373 138 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 EFNA5P52803 228 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 TFDP1Q14186 410 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 MAP7Q14244 749 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 FAXCQ5TGI0 409 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 IER5Q5VY09 327 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 JADE1Q6IE81 842 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 MPZL3Q6UWV2 235 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ZPBP2Q6X784 338 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ARHGAP24Q8N264 748 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 NME8Q8N427 588 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 RSAD2Q8WXG1 361 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 LENG1Q96BZ8 264 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-210ENST00000478979 MPP4Q96JB8 637 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 CDT1Q9H211 546 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 ZNF510Q9Y2H8 683 aa14.67□□□□□ -0.06
CCDC78-210ENST00000478979 A0A087WZ62 844 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 LACTBL1A8MY62 500 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 OR6B1O95007 311 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 DESP17661 470 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 VCPP55072 806 aaKnown RBP14.66□□□□□ -0.06
CCDC78-210ENST00000478979 CDK16Q00536 496 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 SEPT7Q16181 437 aaKnown RBP14.66□□□□□ -0.06
CCDC78-210ENST00000478979 C15orf59Q2T9L4 293 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-210ENST00000478979 C1QTNF12Q5T7M4 302 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 FAM102AQ5T9C2 384 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-210ENST00000478979 C1orf228Q6PIY5 440 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 RIPOR1Q6ZS17 1223 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 LRRC6Q86X45 466 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 MYLK4Q86YV6 388 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-210ENST00000478979 RIOX2Q8IUF8 465 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 UNC45BQ8IWX7 931 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 C12orf29Q8N999 325 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 BBOF1Q8ND07 529 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 FDXACB1Q9BRP7 624 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-210ENST00000478979 RAP1GDS1P52306 607 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 DBN1Q16643 649 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.66□□□□□ -0.06
CCDC78-210ENST00000478979 FNBP1LQ5T0N5 605 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 SATL1Q86VE3 508 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 C1orf127Q8N9H9 656 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 FBXO27Q8NI29 283 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 ARHGEF4Q9NR80 690 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 CLIC5Q9NZA1 410 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 SIX4Q9UIU6 781 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 CHMP2BQ9UQN3 213 aa14.66□□□□□ -0.06
CCDC78-210ENST00000478979 H3BRJ5 948 aa14.65□□□□□ -0.06
CCDC78-210ENST00000478979 DNAJC6O75061 913 aa14.65□□□□□ -0.06
CCDC78-210ENST00000478979 POLR2BP30876 1174 aaKnown RBP14.65□□□□□ -0.06
CCDC78-210ENST00000478979 SH3BGRP55822 239 aaPredicted RBP14.65□□□□□ -0.06
CCDC78-210ENST00000478979 OLFML2BQ68BL8 750 aa14.65□□□□□ -0.06
CCDC78-210ENST00000478979 SULF1Q8IWU6 871 aa14.65□□□□□ -0.06
CCDC78-210ENST00000478979 ZNF276Q8N554 614 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms