RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ZNF677Q86XU0 584 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 ADGRG2Q8IZP9 1017 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 DTWD2Q8NBA8 298 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 NOX5Q96PH1 765 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 KLF16Q9BXK1 252 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 DCLK3Q9C098 648 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 NACA2Q9H009 215 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 CCSER2Q9H7U1 834 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 ECT2Q9H8V3 914 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 NMUR1Q9HB89 426 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 NAGPAQ9UK23 515 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 A0A1W2PQH9 124 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 M0QYV0 167 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 FOXN3O00409 490 aaPredicted RBP12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 LATS1O95835 1130 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 ADH1CP00326 375 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 GLI1P08151 1106 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 DRD1P21728 446 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 BRD2P25440 801 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 TARSP26639 723 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 DAOAP59103 153 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 YWHAGP61981 247 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 ZXDBP98169 803 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 FZD5Q13467 585 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 FBXO43Q4G163 708 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 TMEM196Q5HYL7 178 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 PMF1Q6P1K2 205 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 BHLHA9Q7RTU4 235 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 APTXQ7Z2E3 356 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 LUZP1Q86V48 1076 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 ST13P5Q8NFI4 369 aaPredicted RBP12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 RIN3Q8TB24 985 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 SECISBP2LQ93073 1101 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 ULBP1Q9BZM6 244 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 TAB2Q9NYJ8 693 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 GTSE1Q9NYZ3 720 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 CFAP97Q9P2B7 532 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 LSM7Q9UK45 103 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 FBXO4Q9UKT5 387 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 STRIP2Q9ULQ0 834 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 SIK3Q9Y2K2 1263 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 SH3BP1Q9Y3L3 701 aa12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 HBS1LQ9Y450 684 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-205ENST00000477360 KMT2EQ8IZD2 1858 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 PES1O00541 588 aaKnown RBP12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 THAP12O43422 761 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 PI15O43692 258 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 PAPSS2O95340 614 aaPredicted RBP12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 LSM8O95777 96 aaKnown RBP12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 CHRNB1P11230 501 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 CDH5P33151 784 aaPredicted RBP12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 GJA4P35212 333 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 ADIGQ0VDE8 80 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 NNTQ13423 1086 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 CCINQ13939 588 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 DRAP1Q14919 205 aaPredicted RBP12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 UBXN2BQ14CS0 331 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 ARHGAP44Q17R89 818 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 ZNF528Q3MIS6 628 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 C10orf120Q5SQS8 335 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 IER5LQ5T953 404 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 BSPRYQ5W0U4 402 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 BTBD8Q5XKL5 378 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 MSANTD2Q6P1R3 559 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 GAS2L3Q86XJ1 694 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 ZDHHC17Q8IUH5 632 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 UBA3Q8TBC4 463 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 GOLGA1Q92805 767 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 ZFYVE19Q96K21 471 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 FAM126AQ9BYI3 521 aaPredicted RBP12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 MIS12Q9H081 205 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 VPS16Q9H269 839 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 GANQ9H2C0 597 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 EBF3Q9H4W6 596 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 OSER1Q9NX31 292 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 MARK1Q9P0L2 795 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 MYO6Q9UM54 1294 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 CEP83Q9Y592 693 aa12.96□□□□□ -0.33
CLCNKA-205ENST00000477360 A0A0A0MRY4 1105 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 A0A1W2PQC6 194 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 F8VZ95 297 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 TULP2O00295 520 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 HOXC11O43248 304 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 GREM1O60565 184 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 CLCN1P35523 988 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 KRT9P35527 623 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 CHKAP35790 457 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 SCNN1AP37088 669 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 USP8P40818 1118 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 PGFP49763 221 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 RING1Q06587 406 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 TNK2Q07912 1038 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 GRSF1Q12849 480 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 MTA1Q13330 715 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 PPP2R5DQ14738 602 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 FILIP1LQ4L180 1135 aa12.95□□□□□ -0.34
CLCNKA-205ENST00000477360 HSP90AA4PQ58FG1 418 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms