RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 RAB6BQ9NRW1 208 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 GRID1Q9ULK0 1009 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 SLC12A4Q9UP95 1085 aa17.32■□□□□ 0.36
TVP23B-202ENST00000476139 CLDN5O00501 218 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 CHUKO15111 745 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 ACAT1P24752 427 aaKnown RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 RDXP35241 583 aaKnown RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 ELK3P41970 407 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 AFF1P51825 1210 aaKnown RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 GEMIN4P57678 1058 aaKnown RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 LILRA4P59901 499 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 PDK2Q15119 407 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 ARHGAP17Q68EM7 881 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 SPATA21Q7Z572 469 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 CRYBG2Q8N1P7 616 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 APPL2Q8NEU8 664 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 SNX25Q9H3E2 840 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 E7ESA3 106 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 APOL1O14791 398 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 DNAJC8O75937 253 aaPredicted RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 BEST1O76090 585 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 SUN1O94901 812 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 BST2Q10589 180 aaKnown RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 SLC10A2Q12908 348 aaPredicted RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 DNAJC3Q13217 504 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 FITM2Q8N6M3 262 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 FAF2Q96CS3 445 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 DHX35Q9H5Z1 703 aaKnown RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 ECT2Q9H8V3 914 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 SLCO1B3Q9NPD5 702 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 CD4P01730 458 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 KRT4P19013 534 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 RABGGTBP53611 331 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 GBE1Q04446 702 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 TAF1CQ15572 869 aaPredicted RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 PYROXD2Q8N2H3 581 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 CCDC185Q8N715 623 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 GPATCH11Q8N954 259 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 ATP11CQ8NB49 1132 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 NETO2Q8NC67 525 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 STK32AQ8WU08 396 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 C12orf65Q9H3J6 166 aaKnown RBP17.31■□□□□ 0.36
TVP23B-202ENST00000476139 STK38LQ9Y2H1 464 aa17.31■□□□□ 0.36
TVP23B-202ENST00000476139 SETSIPP0DME0 302 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 TAC1P20366 129 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 L1CAMP32004 1257 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 EFHC2Q5JST6 749 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 SLC9A4Q6AI14 798 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 TWF2Q6IBS0 349 aaKnown RBP17.3■□□□□ 0.36
TVP23B-202ENST00000476139 CCDC110Q8TBZ0 833 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 SMC6Q96SB8 1091 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 KLF6Q99612 283 aaPredicted RBP17.3■□□□□ 0.36
TVP23B-202ENST00000476139 C11orf84Q9BUA3 381 aaPredicted RBP17.3■□□□□ 0.36
TVP23B-202ENST00000476139 TMPRSS4Q9NRS4 437 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 GDAP2Q9NXN4 497 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 MFHAS1Q9Y4C4 1052 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 MYADML2A6NDP7 307 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 GOLGA8RI6L899 631 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 ASMTLO95671 621 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 OAS1P00973 400 aaKnown RBP17.3■□□□□ 0.36
TVP23B-202ENST00000476139 TAF6P49848 677 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 CPT1AP50416 773 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
TVP23B-202ENST00000476139 MGAT5Q09328 741 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 SLC1A5Q15758 541 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 SWT1Q5T5J6 900 aaKnown RBP17.3■□□□□ 0.36
TVP23B-202ENST00000476139 OSTM1Q86WC4 334 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 DENND1AQ8TEH3 1009 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 MAGEB18Q96M61 343 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 PAFAH2Q99487 392 aa17.3■□□□□ 0.36
TVP23B-202ENST00000476139 PSMC3IPQ9P2W1 217 aaPredicted RBP17.3■□□□□ 0.36
TVP23B-202ENST00000476139 C17orf102A2RUQ5 167 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 A8MUI8 341 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 KCNE1P15382 129 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 CYP2F1P24903 491 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 AXLP30530 894 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 BCAT1P54687 386 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 PITX1P78337 314 aaPredicted RBP17.29■□□□□ 0.36
TVP23B-202ENST00000476139 KCNJ11Q14654 390 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 PCBP1Q15365 356 aaKnown RBP eCLIP17.29■□□□□ 0.36
TVP23B-202ENST00000476139 PPP1R21Q6ZMI0 780 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 ADGRF2Q8IZF7 708 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 TEKT4Q8WW24 435 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 PITPNM3Q9BZ71 974 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 NRDE2Q9H7Z3 1164 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 MTMR10Q9NXD2 777 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 PTGESO14684 152 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 MDM4O15151 490 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 CA4P22748 312 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 NDUFV1P49821 464 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 CRYBB1P53674 252 aaPredicted RBP17.29■□□□□ 0.36
TVP23B-202ENST00000476139 NCALDP61601 193 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 XKR4Q5GH76 650 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 SLC26A9Q7LBE3 791 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 TBCBQ99426 244 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 AP5M1Q9H0R1 490 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 ACSS3Q9H6R3 686 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 SLC24A2Q9UI40 661 aa17.29■□□□□ 0.36
TVP23B-202ENST00000476139 SYNJ2BP-COX16A0A087WUM0 186 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 WDR91A4D1P6 747 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms