RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 LAMP2P13473 410 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 RARGP13631 454 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 ZNF268Q14587 947 aaPredicted RBP23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 EFHC1Q5JVL4 640 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 ALKBH5Q6P6C2 394 aaKnown RBP23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 SLC26A9Q7LBE3 791 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 DNAAF5Q86Y56 855 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 TMEM139Q8IV31 216 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 KHSRPQ92945 711 aaKnown RBP eCLIP23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 VCPIP1Q96JH7 1222 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 ASB2Q96Q27 587 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 SLC22A12Q96S37 553 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 EPS15L1Q9UBC2 864 aa23.24■■□□□ 1.31
MCF2L2-209ENST00000475664 TRAV19A0A0A6YYK7 116 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 C2CD4DB7Z1M9 353 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 COCHO43405 550 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 FYNP06241 537 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 RALAP11233 206 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 SP100P23497 879 aaPredicted RBP23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 TAF5Q15542 800 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 BTBD8Q5XKL5 378 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 BEND5Q7L4P6 421 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 TMTC1Q8IUR5 882 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 CMTM8Q8IZV2 173 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 ARL14EPQ8N8R7 260 aaPredicted RBP23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 TDRD5Q8NAT2 981 aaKnown RBP23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 GOLGA1Q92805 767 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 FAM149B1Q96BN6 582 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 ACSF2Q96CM8 615 aaPredicted RBP23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 PDLIM2Q96JY6 352 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 ABCC13Q9NSE7 274 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 WDR35Q9P2L0 1181 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 NR2E1Q9Y466 385 aa23.23■■□□□ 1.31
MCF2L2-209ENST00000475664 GOLGA8SH3BPF8 625 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 HSF2BPO75031 334 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 BMP1P13497 986 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 HDCP19113 662 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 WEE1P30291 646 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 YWHAZP63104 245 aaKnown RBP23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 CCDC122Q5T0U0 273 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 FAM102AQ5T9C2 384 aaPredicted RBP23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 KLHDC10Q6PID8 442 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 ZSCAN18Q8TBC5 510 aaPredicted RBP23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 EDEM1Q92611 657 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 RPGRIP1Q96KN7 1286 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 ASB16Q96NS5 453 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 CYP2S1Q96SQ9 504 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 BAG1Q99933 345 aaPredicted RBP23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 TRIM62Q9BVG3 475 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 RNF38Q9H0F5 515 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 POPDC2Q9HBU9 364 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 SPTLC3Q9NUV7 552 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 PRKAG3Q9UGI9 489 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 NUDT5Q9UKK9 219 aa23.22■■□□□ 1.31
MCF2L2-209ENST00000475664 TCF20Q9UGU0 1960 aaKnown RBP23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 TCRBV5S1A1TA0A578 114 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 SOWAHDA6NJG2 315 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 RRM1P23921 792 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 FAM78AQ5JUQ0 283 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 MSANTD2Q6P1R3 559 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 PHLDB2Q86SQ0 1253 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 CCDC170Q8IYT3 715 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 C3orf20Q8ND61 904 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 SMARCD2Q92925 531 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 SLC2A13Q96QE2 648 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 CDK5RAP1Q96SZ6 601 aaKnown RBP23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 TRPV4Q9HBA0 871 aa23.21■■□□□ 1.31
MCF2L2-209ENST00000475664 ZNF263O14978 683 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 DAB1O75553 588 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 GRAP2O75791 330 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 PRAMEF12O95522 483 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 TBX18O95935 607 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 CKMP06732 381 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 FCARP24071 287 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 ATP5C1P36542 298 aaKnown RBP23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 AVPR1AP37288 418 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 SLC7A9P82251 487 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 C10orf120Q5SQS8 335 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 TADA2BQ86TJ2 420 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 ARID3BQ8IVW6 561 aaPredicted RBP23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 ADHFE1Q8IWW8 467 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 ZDHHC14Q8IZN3 488 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 TRIM11Q96F44 468 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 OLA1Q9NTK5 396 aaKnown RBP23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 TMEM59LQ9UK28 342 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 NAALADL1Q9UQQ1 740 aa23.2■■□□□ 1.3
MCF2L2-209ENST00000475664 LOC730098B7Z3J9 87 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 MDM4O15151 490 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 LCA5LO95447 670 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 MYBL1P10243 752 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 ZP2Q05996 745 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 SYPL2Q5VXT5 272 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 RAD9BQ6WBX8 426 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 RSRC2Q7L4I2 434 aaKnown RBP23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 ARCQ7LC44 396 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 DEFB106AQ8N104 65 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 PLCD3Q8N3E9 789 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 RNF139Q8WU17 664 aa23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 USP13Q92995 863 aaPredicted RBP23.19■■□□□ 1.3
MCF2L2-209ENST00000475664 ZNF653Q96CK0 615 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms