RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 SCN4BQ8IWT1 228 aa20.65■□□□□ 0.9
SSR1-204ENST00000474597 IRGQQ8WZA9 623 aa20.65■□□□□ 0.9
SSR1-204ENST00000474597 GPATCH2LQ9NWQ4 482 aa20.65■□□□□ 0.9
SSR1-204ENST00000474597 SNX24Q9Y343 169 aa20.65■□□□□ 0.9
SSR1-204ENST00000474597 H7C4K7 107 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 M0QYT0 321 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 LIASO43766 372 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 HSPA1AP0DMV8 641 aaKnown RBP20.64■□□□□ 0.9
SSR1-204ENST00000474597 HSPA1BP0DMV9 641 aaKnown RBP20.64■□□□□ 0.9
SSR1-204ENST00000474597 NCAM1P13591 858 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 ATXN1P54253 815 aaKnown RBP20.64■□□□□ 0.9
SSR1-204ENST00000474597 DPYSL3Q14195 570 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 SPOUT1Q5T280 376 aaKnown RBP20.64■□□□□ 0.9
SSR1-204ENST00000474597 HFE2Q6ZVN8 426 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 ZNF365Q70YC5 407 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 FUBP3Q96I24 572 aaKnown RBP eCLIP20.64■□□□□ 0.92e-8■■□□□ 13.8
SSR1-204ENST00000474597 NPY6RQ99463 290 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 FRMD8P1Q9BZ68 369 aaPredicted RBP20.64■□□□□ 0.9
SSR1-204ENST00000474597 ASIC3Q9UHC3 531 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 NAALADL1Q9UQQ1 740 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 ZNF148Q9UQR1 794 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 PCDHB5Q9Y5E4 795 aa20.64■□□□□ 0.9
SSR1-204ENST00000474597 SYNJ2BP-COX16A0A087WUM0 186 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 DGKIO75912 1065 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 RDXP35241 583 aaKnown RBP20.64■□□□□ 0.89
SSR1-204ENST00000474597 DEUP1Q05D60 604 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 IFRD2Q12894 506 aaPredicted RBP20.64■□□□□ 0.89
SSR1-204ENST00000474597 GPS2Q13227 327 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 TFDP2Q14188 446 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 MRPL58Q14197 206 aaKnown RBP20.64■□□□□ 0.89
SSR1-204ENST00000474597 ZC3H12AQ5D1E8 599 aaKnown RBP20.64■□□□□ 0.89
SSR1-204ENST00000474597 DRICH1Q6PGQ1 229 aaPredicted RBP20.64■□□□□ 0.89
SSR1-204ENST00000474597 SCML4Q8N228 414 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 TMEM199Q8N511 208 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 TRIM62Q9BVG3 475 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 RRN3Q9NYV6 651 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 COX16Q9P0S2 106 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 AP4E1Q9UPM8 1137 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 LTBP2Q14767 1821 aa20.64■□□□□ 0.89
SSR1-204ENST00000474597 TRIM43BA6NCK2 446 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 ENDOD1O94919 500 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 FAM153BP0C7A2 387 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 CPB1P15086 417 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 CSF2RAP15509 400 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 ARSEP51690 589 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 ARPP19P56211 112 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 MMRN1Q13201 1228 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 NME3Q13232 169 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 FAM153CQ494X1 144 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 SYPL2Q5VXT5 272 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 PM20D1Q6GTS8 502 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 FAM131BQ86XD5 332 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 VSIG1Q86XK7 387 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 SLC7A14Q8TBB6 771 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 TRIM43Q96BQ3 446 aaPredicted RBP20.63■□□□□ 0.89
SSR1-204ENST00000474597 B3GALT6Q96L58 329 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 ADAM33Q9BZ11 813 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 DHX35Q9H5Z1 703 aaKnown RBP20.63■□□□□ 0.89
SSR1-204ENST00000474597 VIPAS39Q9H9C1 493 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 PCDH18Q9HCL0 1135 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 OGFRQ9NZT2 677 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 FAM153AQ9UHL3 310 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 DNPEPQ9ULA0 475 aa20.63■□□□□ 0.89
SSR1-204ENST00000474597 KIAA0100Q14667 2235 aaKnown RBP20.63■□□□□ 0.89
SSR1-204ENST00000474597 TRIM66O15016 1216 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 KIAA0355O15063 1070 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 EFCAB14O75071 495 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 SLC5A3P53794 718 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 CALCOCO2Q13137 446 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 PTK6Q13882 451 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 PPP6R3Q5H9R7 873 aaPredicted RBP20.62■□□□□ 0.89
SSR1-204ENST00000474597 VSTM1Q6UX27 236 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 ANKS3Q6ZW76 656 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 TOP1MTQ969P6 601 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 NT5C3BQ969T7 300 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 FMO2Q99518 471 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 TTPALQ9BTX7 342 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 OXCT2Q9BYC2 517 aaPredicted RBP20.62■□□□□ 0.89
SSR1-204ENST00000474597 ECHS1P30084 290 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 RPL21P46778 160 aaKnown RBP20.62■□□□□ 0.89
SSR1-204ENST00000474597 VCPP55072 806 aaKnown RBP20.62■□□□□ 0.89
SSR1-204ENST00000474597 OTUD4Q01804 1114 aaKnown RBP20.62■□□□□ 0.89
SSR1-204ENST00000474597 MFSD5Q6N075 450 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 ACTL9Q8TC94 416 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 VWCEQ96DN2 955 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 PGLYRP2Q96PD5 576 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 RNF157Q96PX1 679 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 ZNF670Q9BS34 389 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 NEUROG2Q9H2A3 272 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 DRG1Q9Y295 367 aaKnown RBP20.62■□□□□ 0.89
SSR1-204ENST00000474597 USP3Q9Y6I4 520 aa20.62■□□□□ 0.89
SSR1-204ENST00000474597 APOC4-APOC2K7ER74 178 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 APOC2P02655 101 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 FYNP06241 537 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 PLTPP55058 493 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 PITX1P78337 314 aaPredicted RBP20.61■□□□□ 0.89
SSR1-204ENST00000474597 TRIP13Q15645 432 aaPredicted RBP20.61■□□□□ 0.89
SSR1-204ENST00000474597 DPYSL2Q16555 572 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 CA9Q16790 459 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 ANKRD20A8PQ5CZ79 823 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms