RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 HK3P52790 923 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 POU5F1BQ06416 359 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 CCNIQ14094 377 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 LY6KQ17RY6 165 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 UAP1L1Q3KQV9 507 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 PGM2L1Q6PCE3 622 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 SPSB3Q6PJ21 355 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 PCSK9Q8NBP7 692 aaKnown RBP2.48□□□□□ -2.01
CCDC39-203ENST00000473854 NUAK2Q9H093 628 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 ARL8BQ9NVJ2 186 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 AGO2Q9UKV8 859 aaKnown RBP2.48□□□□□ -2.01
CCDC39-203ENST00000473854 USP22Q9UPT9 525 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 TMX2Q9Y320 296 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 PCDHAC2Q9Y5I4 1007 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 TRBV5-3A0A0A0MS03 114 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 RPS10-NUDT3A0A1W2PQS6 291 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 SMTNL1A8MU46 457 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 KRT36O76013 467 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 DDNO94850 711 aaPredicted RBP2.47□□□□□ -2.01
CCDC39-203ENST00000473854 AHSGP02765 367 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 THP07101 528 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 EPHA3P29320 983 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 RFX2P48378 723 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 BCAT1P54687 386 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 EXOSC9Q06265 439 aaKnown RBP2.47□□□□□ -2.01
CCDC39-203ENST00000473854 KRTAP24-1Q3LI83 254 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 ANO6Q4KMQ2 910 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 KIAA1755Q5JYT7 1200 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 ADAM5Q6NVV9 412 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 SPARTQ8N0X7 666 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 UBR7Q8N806 425 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 C12orf76Q8N812 135 aaPredicted RBP2.47□□□□□ -2.01
CCDC39-203ENST00000473854 SREK1Q8WXA9 508 aaKnown RBP2.47□□□□□ -2.01
CCDC39-203ENST00000473854 INPP4AQ96PE3 977 aaPredicted RBP2.47□□□□□ -2.01
CCDC39-203ENST00000473854 MESP1Q9BRJ9 268 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 LMBRD1Q9NUN5 540 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 ZSCAN32Q9NX65 697 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 UNC13AQ9UPW8 1703 aa2.47□□□□□ -2.01
CCDC39-203ENST00000473854 SPATA31A1Q5TZJ5 1347 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 LRRC14BA6NHZ5 514 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 XPOTO43592 962 aaKnown RBP2.46□□□□□ -2.02
CCDC39-203ENST00000473854 TYRP14679 529 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 TFEBP19484 476 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 RPS6KB1P23443 525 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 NOVP48745 357 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 ADKP55263 362 aaKnown RBP2.46□□□□□ -2.02
CCDC39-203ENST00000473854 KRT85P78386 507 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 ROR2Q01974 943 aaKnown RBP2.46□□□□□ -2.02
CCDC39-203ENST00000473854 DLGAP5Q15398 846 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 TRILQ7L0X0 811 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 DAAM2Q86T65 1068 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 PPP1R3BQ86XI6 285 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 GAS2L3Q86XJ1 694 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 CTHRC1Q96CG8 243 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 FCRL5Q96RD9 977 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 PIMREGQ9BSJ6 248 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 GATA5Q9BWX5 397 aaPredicted RBP2.46□□□□□ -2.02
CCDC39-203ENST00000473854 TASP1Q9H6P5 420 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 PNPOQ9NVS9 261 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 LPAR3Q9UBY5 353 aa2.46□□□□□ -2.02
CCDC39-203ENST00000473854 H0YGN5 161 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 ENPP3O14638 875 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 HOXA11P31270 313 aaPredicted RBP2.45□□□□□ -2.02
CCDC39-203ENST00000473854 SOX8P57073 446 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 KPNB1Q14974 876 aaKnown RBP2.45□□□□□ -2.02
CCDC39-203ENST00000473854 ZNF718Q3SXZ3 478 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 ZNF672Q499Z4 452 aaPredicted RBP2.45□□□□□ -2.02
CCDC39-203ENST00000473854 INO80DQ53TQ3 878 aaPredicted RBP2.45□□□□□ -2.02
CCDC39-203ENST00000473854 PRAMEF19Q5SWL8 479 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 WBP2NLQ6ICG8 309 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 UEVLDQ8IX04 471 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 PNPLA1Q8N8W4 532 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 C1orf162Q8NEQ5 155 aaPredicted RBP2.45□□□□□ -2.02
CCDC39-203ENST00000473854 COG1Q8WTW3 980 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 PIGKQ92643 395 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 EDC3Q96F86 508 aaKnown RBP2.45□□□□□ -2.02
CCDC39-203ENST00000473854 TM2D2Q9BX73 214 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 VN1R3Q9BXE9 311 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 SLKQ9H2G2 1235 aaPredicted RBP2.45□□□□□ -2.02
CCDC39-203ENST00000473854 SARS2Q9NP81 518 aaKnown RBP2.45□□□□□ -2.02
CCDC39-203ENST00000473854 PCDHA1Q9Y5I3 950 aa2.45□□□□□ -2.02
CCDC39-203ENST00000473854 TP53BP1Q12888 1972 aaPredicted RBP2.44□□□□□ -2.02
CCDC39-203ENST00000473854 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.44□□□□□ -2.02
CCDC39-203ENST00000473854 SLC16A5O15375 505 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 SPRY2O43597 315 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 ATG13O75143 517 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 FTLP02792 175 aaPredicted RBP2.44□□□□□ -2.02
CCDC39-203ENST00000473854 SP1P08047 785 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 GYS2P54840 703 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 TXNL4AP83876 142 aaKnown RBP2.44□□□□□ -2.02
CCDC39-203ENST00000473854 CRYZQ08257 329 aaKnown RBP2.44□□□□□ -2.02
CCDC39-203ENST00000473854 RBM39Q14498 530 aaKnown RBP2.44□□□□□ -2.02
CCDC39-203ENST00000473854 FAM76BQ5HYJ3 339 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 DSTYKQ6XUX3 929 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 ZNF280BQ86YH2 543 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 BPIFB1Q8TDL5 484 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 TMEM171Q8WVE6 324 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 CENPIQ92674 756 aaPredicted RBP2.44□□□□□ -2.02
CCDC39-203ENST00000473854 PPP2R3CQ969Q6 453 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 MTFMTQ96DP5 389 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms