RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 MATKP42679 507 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 SULT1E1P49888 294 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 SLC5A3P53794 718 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 PTPN5P54829 565 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 LLGL1Q15334 1064 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 LONRF2Q1L5Z9 754 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 SEL1L2Q5TEA6 688 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 LRRC38Q5VT99 294 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 SYPL2Q5VXT5 272 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 SCYL2Q6P3W7 929 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 THSD4Q6ZMP0 1018 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 ACTRT1Q8TDG2 376 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 GIPC2Q8TF65 315 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 FAM172AQ8WUF8 416 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 IRGQQ8WZA9 623 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 ACSF2Q96CM8 615 aaPredicted RBP11.23□□□□□ -0.61
SP140-208ENST00000473711 SLC2A13Q96QE2 648 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 TBCBQ99426 244 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 CARD9Q9H257 536 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 POPDC2Q9HBU9 364 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 NGRNQ9NPE2 291 aaKnown RBP11.23□□□□□ -0.61
SP140-208ENST00000473711 MRPL17Q9NRX2 175 aaKnown RBP11.23□□□□□ -0.61
SP140-208ENST00000473711 KLHL11Q9NVR0 708 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.23□□□□□ -0.61
SP140-208ENST00000473711 USP18Q9UMW8 372 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 V9GYY5 206 aaPredicted RBP11.23□□□□□ -0.61
SP140-208ENST00000473711 MKI67P46013 3256 aaKnown RBP11.23□□□□□ -0.61
SP140-208ENST00000473711 PI4K2BG5E9Z4 385 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 PGRMC1O00264 195 aaKnown RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 LILRB3O75022 631 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 TADA3O75528 432 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 ABLIM3O94929 683 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 CSPG5O95196 566 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 ZRANB2O95218 330 aaKnown RBP eCLIP11.22□□□□□ -0.61
SP140-208ENST00000473711 SEC24AO95486 1093 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 FGGP02679 453 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 LTFP02788 710 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 KRT1P04264 644 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 FYNP06241 537 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 CTSAP10619 480 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 DESP17661 470 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 PCK1P35558 622 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 PTPN9P43378 593 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 USP46P62068 366 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 RPL10AP62906 217 aaKnown RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 PITX1P78337 314 aaPredicted RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 SLC25A11Q02978 314 aaKnown RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 C2orf54Q08AI8 447 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 RAB33AQ14088 237 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 NAA30Q147X3 362 aaPredicted RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 ODF2Q5BJF6 829 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 BSPRYQ5W0U4 402 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 FAM109BQ6ICB4 259 aaPredicted RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 BHLHA9Q7RTU4 235 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 ADAT2Q7Z6V5 191 aaKnown RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 CCDC50Q8IVM0 306 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 KATNAL2Q8IYT4 538 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 RCOR2Q8IZ40 523 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 SCML4Q8N228 414 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 ZNF461Q8TAF7 563 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 EDEM1Q92611 657 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 GOLGA1Q92805 767 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 C11orf84Q9BUA3 381 aaPredicted RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 ZBP1Q9H171 429 aa11.22□□□□□ -0.61
SP140-208ENST00000473711 ALG13Q9NP73 1137 aaKnown RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 DDX56Q9NY93 547 aaKnown RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 AFF4Q9UHB7 1163 aaKnown RBP11.22□□□□□ -0.61
SP140-208ENST00000473711 NLRC5Q86WI3 1866 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 SYNJ2BP-COX16A0A087WUM0 186 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 UQCRHLA0A096LP55 91 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 A0A1W2PQH9 124 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 SLC38A8A6NNN8 435 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 M0QYT0 321 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 PRPSAP2O60256 369 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 ARHGEF15O94989 841 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 UQCRHP07919 91 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 KRT7P08729 469 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 RARAP10276 462 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 NCAM1P13591 858 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 YWHAQP27348 245 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 TUFMP49411 452 aaKnown RBP11.21□□□□□ -0.61
SP140-208ENST00000473711 PGFP49763 221 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 ATXN1P54253 815 aaKnown RBP11.21□□□□□ -0.61
SP140-208ENST00000473711 HDAC4P56524 1084 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 ERVFC1P60507 584 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 YWHAGP61981 247 aaKnown RBP eCLIP11.21□□□□□ -0.61
SP140-208ENST00000473711 MTMR3Q13615 1198 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 SMC1AQ14683 1233 aaKnown RBP11.21□□□□□ -0.61
SP140-208ENST00000473711 SMTNL2Q2TAL5 461 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 SLC25A52Q3SY17 297 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 KCNT1Q5JUK3 1230 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 HABP4Q5JVS0 413 aaKnown RBP11.21□□□□□ -0.61
SP140-208ENST00000473711 TEX35Q5T0J7 233 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 BTBD8Q5XKL5 378 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 TPGS2Q68CL5 300 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 DENND5BQ6ZUT9 1274 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 ZNF572Q7Z3I7 529 aaPredicted RBP11.21□□□□□ -0.61
SP140-208ENST00000473711 TMC7Q7Z402 723 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 SPRED2Q7Z698 418 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms