RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 NOC3LQ8WTT2 800 aaKnown RBP9.92□□□□□ -0.82
VCL-204ENST00000472585 CRELD1Q96HD1 420 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 FAM124BQ9H5Z6 455 aaPredicted RBP9.92□□□□□ -0.82
VCL-204ENST00000472585 OLFML3Q9NRN5 406 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 PPP4R2Q9NY27 417 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 KIAA1522Q9P206 1035 aaPredicted RBP9.92□□□□□ -0.82
VCL-204ENST00000472585 SEL1LQ9UBV2 794 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 SUSD2Q9UGT4 822 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 A0A087WV48 116 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 IGHV1OR15-9A0A0B4J2B8 117 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 TRABD2BA6NFA1 517 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 PRRT4C9JH25 899 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 CAPN9O14815 690 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 ATXN7O15265 892 aaPredicted RBP9.91□□□□□ -0.82
VCL-204ENST00000472585 NDUFS2O75306 463 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 TMEM191BP0C7N4 346 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 MBL2P11226 248 aaPredicted RBP9.91□□□□□ -0.82
VCL-204ENST00000472585 GAP43P17677 238 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 GNL1P36915 607 aaPredicted RBP9.91□□□□□ -0.82
VCL-204ENST00000472585 LARP1BQ659C4 914 aaKnown RBP9.91□□□□□ -0.82
VCL-204ENST00000472585 SV2BQ7L1I2 683 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 TMPRSS7Q7RTY8 843 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 TRAPPC11Q7Z392 1133 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 TRMT11Q7Z4G4 463 aaKnown RBP9.91□□□□□ -0.82
VCL-204ENST00000472585 GLRX5Q86SX6 157 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 SLCO6A1Q86UG4 719 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 GALNT15Q8N3T1 639 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 RASSF8Q8NHQ8 419 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 PIP4K2CQ8TBX8 421 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 KCNV2Q8TDN2 545 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 ZDHHC16Q969W1 377 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 HSPA12BQ96MM6 686 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 CCSER2Q9H7U1 834 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 IL37Q9NZH6 218 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 CALCOCO1Q9P1Z2 691 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 EXOC7Q9UPT5 735 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 RAI2Q9Y5P3 530 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 KNTC1P50748 2209 aa9.91□□□□□ -0.82
VCL-204ENST00000472585 E2F8A0AVK6 867 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 TBC1D3BA6NDS4 549 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 WASH3PC4AMC7 463 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 SLC9A3R1O14745 358 aaPredicted RBP9.9□□□□□ -0.82
VCL-204ENST00000472585 TGFB1I1O43294 461 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 ZNF217O75362 1048 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 TACC1O75410 805 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 C1QL1O75973 258 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 ZDHHC11BP0C7U3 371 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 NDUFV2P19404 249 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 MAOBP27338 520 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 PPP3CCP48454 512 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 CDH8P55286 799 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 IFRD2Q12894 506 aaPredicted RBP9.9□□□□□ -0.82
VCL-204ENST00000472585 MYO1EQ12965 1108 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 DUOXA2Q1HG44 320 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 TDRD10Q5VZ19 366 aaKnown RBP9.9□□□□□ -0.82
VCL-204ENST00000472585 RRAGBQ5VZM2 374 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 EGFLAMQ63HQ2 1017 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 NUDT18Q6ZVK8 323 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 HS2ST1Q7LGA3 356 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 MARCH9Q86YJ5 346 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 SYCP3Q8IZU3 236 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 ZNF513Q8N8E2 541 aaPredicted RBP9.9□□□□□ -0.82
VCL-204ENST00000472585 TRIML1Q8N9V2 468 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 RDH13Q8NBN7 331 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 PLEKHO2Q8TD55 490 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 ANKRD36BP1Q96IX9 119 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 CEP295NLQ96MC4 621 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 MMS19Q96T76 1030 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 ZDHHC5Q9C0B5 715 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 XYLT2Q9H1B5 865 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 SPHK2Q9NRA0 654 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 PANK4Q9NVE7 773 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 STK17AQ9UEE5 414 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 PCOLCE2Q9UKZ9 415 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 CYP8B1Q9UNU6 501 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 STARD13Q9Y3M8 1113 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 SRPRBQ9Y5M8 271 aaKnown RBP9.9□□□□□ -0.82
VCL-204ENST00000472585 HECTD1Q9ULT8 2610 aa9.9□□□□□ -0.82
VCL-204ENST00000472585 ZNF233A6NK53 670 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 GOLGA8CPA6NN73 597 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.89□□□□□ -0.83
VCL-204ENST00000472585 J3QKU1 62 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 TRIM66O15016 1216 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 HOXC11O43248 304 aaPredicted RBP9.89□□□□□ -0.83
VCL-204ENST00000472585 CBFA2T3O75081 653 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 BEST1O76090 585 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 TBX18O95935 607 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 ADH1CP00326 375 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 CISD3P0C7P0 127 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 IDEP14735 1019 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 ANXA13P27216 316 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 YWHAQP27348 245 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 BNC1Q01954 994 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 GAD2Q05329 585 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 MAPRE1Q15691 268 aaKnown RBP9.89□□□□□ -0.83
VCL-204ENST00000472585 PREPLQ4J6C6 727 aaPredicted RBP9.89□□□□□ -0.83
VCL-204ENST00000472585 WDR45BQ5MNZ6 344 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 C10orf76Q5T2E6 689 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 SNX30Q5VWJ9 437 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms