RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ZNF445P59923 1031 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 COG7P83436 770 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 NR1H3Q13133 447 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 NR1I3Q14994 352 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 BSPRYQ5W0U4 402 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 ZNF852Q6ZMS4 543 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 HFE2Q6ZVN8 426 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 SCD5Q86SK9 330 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 TMEM110Q86TL2 294 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 FBXL6Q8N531 539 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 MSANTD4Q8NCY6 345 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 FLCNQ8NFG4 579 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 IPO4Q8TEX9 1081 aaKnown RBP14.9□□□□□ -0.02
BRCA1-211ENST00000472490 FAM83CQ9BQN1 747 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 NUP58Q9BVL2 599 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 SLC4A5Q9BY07 1137 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 MIS12Q9H081 205 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 NMUR1Q9HB89 426 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 C11orf16Q9NQ32 467 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 HEBP1Q9NRV9 189 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 OSER1Q9NX31 292 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 LSM7Q9UK45 103 aaKnown RBP14.9□□□□□ -0.02
BRCA1-211ENST00000472490 MYO6Q9UM54 1294 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 KRBA1A5PL33 1030 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 DAOAP59103 153 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 PDCLQ13371 301 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 RUNX3Q13761 415 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 ITPRIPL2Q3MIP1 535 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 TPRG1Q6ZUI0 275 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 PASD1Q8IV76 773 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 SCUBE3Q8IX30 993 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 CPA6Q8N4T0 437 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 OTUB2Q96DC9 234 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 IQCDQ96DY2 449 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 ZFYVE19Q96K21 471 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 PPP1R13BQ96KQ4 1090 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 NAP1L5Q96NT1 182 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-211ENST00000472490 LRFN3Q9BTN0 628 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 EDEM3Q9BZQ6 932 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 SYNCQ9H7C4 482 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 CFAP97Q9P2B7 532 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 PIAS3Q9Y6X2 628 aa14.89□□□□□ -0.03
BRCA1-211ENST00000472490 DOCK8Q8NF50 2099 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 KANSL1LA0AUZ9 987 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 YJEFN3A6XGL0 299 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 E7ENQ6 273 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 PIK3R2O00459 728 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 NCAM2O15394 837 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 CBFA2T2O43439 604 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 NFATC1O95644 943 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 TBX18O95935 607 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 PGFP49763 221 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 ZXDBP98169 803 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 CDR2Q01850 454 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 FIGNQ5HY92 759 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 ASTLQ6HA08 431 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-211ENST00000472490 TRIM72Q6ZMU5 477 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 RALGPS2Q86X27 583 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-211ENST00000472490 MIB1Q86YT6 1006 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 ZDHHC17Q8IUH5 632 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 EPS8L1Q8TE68 723 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 ANP32EQ9BTT0 268 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 EBF3Q9H4W6 596 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 TBC1D17Q9HA65 648 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 GTSE1Q9NYZ3 720 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 MARCH2Q9P0N8 246 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 RASAL2Q9UJF2 1139 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 ZNF510Q9Y2H8 683 aa14.88□□□□□ -0.03
BRCA1-211ENST00000472490 E5RJQ4 531 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 CAPN9O14815 690 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 LTFP02788 710 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 GLI1P08151 1106 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 FERP16591 822 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 CDH5P33151 784 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-211ENST00000472490 TNK2Q07912 1038 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 EFHC1Q5JVL4 640 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 TAF3Q5VWG9 929 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 TOGARAM2Q6ZUX3 1019 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 HTR3DQ70Z44 454 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 BEND5Q7L4P6 421 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 BHLHA9Q7RTU4 235 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 NOP9Q86U38 636 aaKnown RBP14.87□□□□□ -0.03
BRCA1-211ENST00000472490 C1orf131Q8NDD1 294 aaKnown RBP14.87□□□□□ -0.03
BRCA1-211ENST00000472490 ZNF397Q8NF99 534 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-211ENST00000472490 RIN3Q8TB24 985 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 DDX1Q92499 740 aaKnown RBP14.87□□□□□ -0.03
BRCA1-211ENST00000472490 FAM3CQ92520 227 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 FAM149B1Q96BN6 582 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 ZFRQ96KR1 1074 aaKnown RBP14.87□□□□□ -0.03
BRCA1-211ENST00000472490 DDX23Q9BUQ8 820 aaKnown RBP14.87□□□□□ -0.03
BRCA1-211ENST00000472490 KLF16Q9BXK1 252 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-211ENST00000472490 OSBPL6Q9BZF3 934 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 DCLK3Q9C098 648 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 NUCKS1Q9H1E3 243 aaKnown RBP14.87□□□□□ -0.03
BRCA1-211ENST00000472490 SIT1Q9Y3P8 196 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 WNT6Q9Y6F9 365 aa14.87□□□□□ -0.03
BRCA1-211ENST00000472490 TTC28Q96AY4 2481 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 GABBR2O75899 941 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 ADH1CP00326 375 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 NCAM1P13591 858 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms