RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 KLF16Q9BXK1 252 aaPredicted RBP23.78■■□□□ 1.4
C9orf3-213ENST00000471978 OSER1Q9NX31 292 aa23.78■■□□□ 1.4
C9orf3-213ENST00000471978 GOLGA6L4A6NEF3 574 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 HOXC11O43248 304 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-213ENST00000471978 STX10O60499 249 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 GBP1P32455 592 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 MPLP40238 635 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 PRCPP42785 496 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 MXI1P50539 228 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 HSF5Q4G112 596 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-213ENST00000471978 PLA2G2CQ5R387 149 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 PPP1R26Q5T8A7 1209 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-213ENST00000471978 TMEM92Q6UXU6 159 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 HTR3DQ70Z44 454 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 ETFBKMTQ8IXQ9 262 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 PHTF2Q8N3S3 785 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 MDGA1Q8NFP4 955 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 HEXIM2Q96MH2 286 aaKnown RBP23.77■■□□□ 1.4
C9orf3-213ENST00000471978 DUSP16Q9BY84 665 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 SMOC1Q9H4F8 434 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 NMUR1Q9HB89 426 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 RAB20Q9NX57 234 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 DEC1Q9P2X7 70 aa23.77■■□□□ 1.4
C9orf3-213ENST00000471978 A0A1W2PQH9 124 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 TBC1D3BA6NDS4 549 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 SGK1O00141 431 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 TULP3O75386 442 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 ALDH1A2O94788 518 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 CHRM1P11229 460 aaPredicted RBP23.76■■□□□ 1.39
C9orf3-213ENST00000471978 RARGP13631 454 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 HNRNPLP14866 589 aaKnown RBP eCLIP23.76■■□□□ 1.393e-10■■■□□ 15.4
C9orf3-213ENST00000471978 KIR2DL1P43626 348 aaPredicted RBP23.76■■□□□ 1.39
C9orf3-213ENST00000471978 KIF11P52732 1056 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 GOLGA8FQ08AF8 430 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 GOLGA8DPQ0D2H9 430 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 PREPLQ4J6C6 727 aaPredicted RBP23.76■■□□□ 1.39
C9orf3-213ENST00000471978 FAXDC2Q96IV6 333 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 VPS45Q9NRW7 570 aa23.76■■□□□ 1.39
C9orf3-213ENST00000471978 GREM1O60565 184 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 CREB5Q02930 508 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 BECN1Q14457 450 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 EOGTQ5NDL2 527 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 ZNF658Q5TYW1 1059 aaPredicted RBP23.75■■□□□ 1.39
C9orf3-213ENST00000471978 C11orf74Q86VG3 221 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 TTC39CQ8N584 583 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 GSDMAQ96QA5 445 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 TSG101Q99816 390 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 ZDHHC4Q9NPG8 344 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 RXFP3Q9NSD7 469 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 CISHQ9NSE2 258 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.75■■□□□ 1.39
C9orf3-213ENST00000471978 DNMT3LQ9UJW3 386 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 NAGPAQ9UK23 515 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 LSM7Q9UK45 103 aaKnown RBP23.75■■□□□ 1.39
C9orf3-213ENST00000471978 NUDT5Q9UKK9 219 aa23.75■■□□□ 1.39
C9orf3-213ENST00000471978 SMC2O95347 1197 aa23.74■■□□□ 1.39
C9orf3-213ENST00000471978 LIMK1P53667 647 aa23.74■■□□□ 1.39
C9orf3-213ENST00000471978 PPM1JQ5JR12 505 aa23.74■■□□□ 1.39
C9orf3-213ENST00000471978 C10orf120Q5SQS8 335 aa23.74■■□□□ 1.39
C9orf3-213ENST00000471978 TCERG1LQ5VWI1 586 aa23.74■■□□□ 1.39
C9orf3-213ENST00000471978 IL31Q6EBC2 164 aa23.74■■□□□ 1.39
C9orf3-213ENST00000471978 KLHDC10Q6PID8 442 aa23.74■■□□□ 1.39
C9orf3-213ENST00000471978 NUDT18Q6ZVK8 323 aa23.74■■□□□ 1.39
C9orf3-213ENST00000471978 CCDC186Q7Z3E2 898 aa23.74■■□□□ 1.39
C9orf3-213ENST00000471978 POLMQ9NP87 494 aaPredicted RBP23.74■■□□□ 1.39
C9orf3-213ENST00000471978 MDM4O15151 490 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 SLC16A3O15427 465 aaKnown RBP23.73■■□□□ 1.39
C9orf3-213ENST00000471978 ADAM23O75077 832 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 PLA2G4AP47712 749 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 PSEN1P49768 467 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 COBLL1Q53SF7 1204 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 DCAF17Q5H9S7 520 aaPredicted RBP23.73■■□□□ 1.39
C9orf3-213ENST00000471978 SCD5Q86SK9 330 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 TADA2BQ86TJ2 420 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 TERB1Q8NA31 727 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 SLC4A11Q8NBS3 891 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 ENGASEQ8NFI3 743 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 TATDN2Q93075 761 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 TMEM176AQ96HP8 235 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 ARID3AQ99856 593 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 USP3Q9Y6I4 520 aa23.73■■□□□ 1.39
C9orf3-213ENST00000471978 BCLAF3A2AJT9 711 aaKnown RBP23.72■■□□□ 1.39
C9orf3-213ENST00000471978 NEDD8-MDP1E9PL57 170 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 TRIM24O15164 1050 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 CAVIN2O95810 425 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 BCKDHBP21953 392 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 RAD23BP54727 409 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 NUCB2P80303 420 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 FKBP3Q00688 224 aaKnown RBP23.72■■□□□ 1.39
C9orf3-213ENST00000471978 CBWD6Q4V339 395 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 CBWD3Q5JTY5 395 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 CBWD5Q5RIA9 395 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 C10orf76Q5T2E6 689 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 PMS2CLQ68D20 193 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 ANKRD40Q6AI12 368 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 GRAMD4Q6IC98 578 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 TCEAL6Q6IPX3 200 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 TPGS1Q6ZTW0 290 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 ZNF513Q8N8E2 541 aaPredicted RBP23.72■■□□□ 1.39
C9orf3-213ENST00000471978 KCNV2Q8TDN2 545 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms