RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TBC1D10BQ4KMP7 808 aaPredicted RBP6.54□□□□□ -1.36
CKS1B-204ENST00000471245 PLAG1Q6DJT9 500 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 KIAA0408Q6ZU52 694 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 CIR1Q86X95 450 aaPredicted RBP6.54□□□□□ -1.36
CKS1B-204ENST00000471245 ATG16L2Q8NAA4 619 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 POC1BQ8TC44 478 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 IPO4Q8TEX9 1081 aaKnown RBP6.54□□□□□ -1.36
CKS1B-204ENST00000471245 MARS2Q96GW9 593 aaKnown RBP6.54□□□□□ -1.36
CKS1B-204ENST00000471245 PHACTR3Q96KR7 559 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 PAGR1Q9BTK6 254 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.54□□□□□ -1.36
CKS1B-204ENST00000471245 TERF2IPQ9NYB0 399 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 LRFN1Q9P244 771 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 DKK4Q9UBT3 224 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 ASAP1Q9ULH1 1129 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 KDRP35968 1356 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 TJP1Q07157 1748 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 TNRC18O15417 2968 aaPredicted RBP6.53□□□□□ -1.36
CKS1B-204ENST00000471245 GLTPD2A6NH11 291 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 GOLGA6L6A8MZA4 724 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 FOXS1O43638 330 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 PRICKLE3O43900 615 aaPredicted RBP6.53□□□□□ -1.36
CKS1B-204ENST00000471245 VPS4BO75351 444 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 DHRS4L1P0CG22 281 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 TPH1P17752 444 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 LRPAP1P30533 357 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 CTSWP56202 376 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 NHLH2Q02577 135 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 BOP1Q14137 746 aaKnown RBP6.53□□□□□ -1.36
CKS1B-204ENST00000471245 RALBP1Q15311 655 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 TANGO2Q6ICL3 276 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 RFX8Q6ZV50 586 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 ANKRD18AQ8IVF6 992 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 OR56A1Q8NGH5 318 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 TBC1D20Q96BZ9 403 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 EID2BQ96D98 161 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 RBM15Q96T37 977 aaKnown RBP eCLIP6.53□□□□□ -1.36
CKS1B-204ENST00000471245 TTYH3Q9C0H2 523 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 PRDM16Q9HAZ2 1276 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 SAGE1Q9NXZ1 904 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 CTTNBP2NLQ9P2B4 639 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 IGSF9Q9P2J2 1179 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 DNMT3BQ9UBC3 853 aaKnown RBP6.53□□□□□ -1.36
CKS1B-204ENST00000471245 ZNF69Q9UC07 566 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 ANAPC4Q9UJX5 808 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 ATP11BQ9Y2G3 1177 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 RAD54BQ9Y620 910 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 CDY1Q9Y6F8 540 aa6.53□□□□□ -1.36
CKS1B-204ENST00000471245 ZNF536O15090 1300 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 NCAPD2Q15021 1401 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 CAPN14A8MX76 684 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 H7C4K7 107 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 M0R3H8 397 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 GPR42O15529 346 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 RRP9O43818 475 aaKnown RBP6.52□□□□□ -1.37
CKS1B-204ENST00000471245 ITGB3P05106 788 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 KCNA2P16389 499 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 CHRNA5P30532 468 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 GCLCP48506 637 aaPredicted RBP6.52□□□□□ -1.37
CKS1B-204ENST00000471245 PTDSS1P48651 473 aaKnown RBP6.52□□□□□ -1.37
CKS1B-204ENST00000471245 ITGA8P53708 1063 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 SLC5A9Q2M3M2 681 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 SPTY2D1Q68D10 685 aaPredicted RBP6.52□□□□□ -1.37
CKS1B-204ENST00000471245 MRNIPQ6NTE8 343 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 TAF2Q6P1X5 1199 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 MZT2AQ6P582 158 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 TMED8Q6PL24 325 aaPredicted RBP6.52□□□□□ -1.37
CKS1B-204ENST00000471245 LAYNQ6UX15 382 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 TMPRSS9Q7Z410 1059 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 GSPT2Q8IYD1 628 aaKnown RBP6.52□□□□□ -1.37
CKS1B-204ENST00000471245 DCLRE1CQ96SD1 692 aaKnown RBP6.52□□□□□ -1.37
CKS1B-204ENST00000471245 MNTQ99583 582 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 KATNAL1Q9BW62 490 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 SSBP3Q9BWW4 388 aaPredicted RBP6.52□□□□□ -1.37
CKS1B-204ENST00000471245 TMOD3Q9NYL9 352 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 VSX1Q9NZR4 365 aaPredicted RBP6.52□□□□□ -1.37
CKS1B-204ENST00000471245 HSFX1Q9UBD0 423 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 CA14Q9ULX7 337 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 LZTS1Q9Y250 596 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 INSRP06213 1382 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 SCN4AP35499 1836 aa6.52□□□□□ -1.37
CKS1B-204ENST00000471245 ANKRD31Q8N7Z5 1873 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 A0A1B0GTW7 788 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 AQP12BA6NM10 295 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 PATE3B3GLJ2 98 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 LEFTY2O00292 366 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 TRIM38O00635 465 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 GLP2RO95838 553 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 SPATA31D3P0C874 917 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 COMTP21964 271 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 FGFR4P22455 802 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 SLC5A2P31639 672 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 RFC4P35249 363 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 PXNP49023 591 aaPredicted RBP6.51□□□□□ -1.37
CKS1B-204ENST00000471245 ARL4CP56559 192 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 LILRA4P59901 499 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 KRT17Q04695 432 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 DDR1Q08345 913 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 ZNF750Q32MQ0 723 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 TSHZ3Q63HK5 1081 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms