RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 INTS6LQ5JSJ4 861 aaKnown RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 EFHC1Q5JVL4 640 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 RARS2Q5T160 578 aaKnown RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 OVOS1Q6IE37 1185 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 WDR93Q6P2C0 686 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 ZC3H14Q6PJT7 736 aaKnown RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 OLFML1Q6UWY5 402 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 CD300LGQ6UXG3 332 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 GPR149Q86SP6 731 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 TTC30AQ86WT1 665 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 PSTKQ8IV42 348 aaKnown RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 DCP1BQ8IZD4 617 aaKnown RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 FUKQ8N0W3 1084 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 C2orf15Q8WU43 125 aaKnown RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 HDAC7Q8WUI4 952 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 IRGQQ8WZA9 623 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 ANKRD7Q92527 254 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 PKNOX2Q96KN3 472 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 PKMYT1Q99640 499 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 APOL5Q9BWW9 433 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 ZBP1Q9H171 429 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 MRPL17Q9NRX2 175 aaKnown RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 FAM86C1Q9NVL1 165 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 WNT16Q9UBV4 365 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 RAB21Q9UL25 225 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 INPP5FQ9Y2H2 1132 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 SCN1AP35498 2009 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 CCDC151A5D8V7 595 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 C2CD4BA6NLJ0 364 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 H7C4K7 107 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 ATMINO43313 823 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 CEP104O60308 925 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 RNF8O76064 485 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 ADH1AP07327 375 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 GALTP07902 379 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 SP100P23497 879 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 TNFRSF8P28908 595 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 MAGEA11P43364 429 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 ID4P47928 161 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 FNTAP49354 379 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 AFF1P51825 1210 aaKnown RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 ZNF135P52742 658 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 AIF1P55008 147 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 SLC6A3Q01959 620 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 PDE4CQ08493 712 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 MRPL58Q14197 206 aaKnown RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 CYP1B1Q16678 543 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 VSTM1Q6UX27 236 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 MAATS1Q7Z4T9 603 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 OSTM1Q86WC4 334 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 RCOR2Q8IZ40 523 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 TMEM105Q8N8V8 129 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 C12orf29Q8N999 325 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 C12orf50Q8NA57 414 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 C3orf58Q8NDZ4 430 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 FLCNQ8NFG4 579 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 CMASQ8NFW8 434 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 SLC2A14Q8TDB8 520 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 SLC22A17Q8WUG5 538 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 HNRNPLLQ8WVV9 542 aaKnown RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 TEKT4Q8WW24 435 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 MCEEQ96PE7 176 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 DMAP1Q9NPF5 467 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 CNGB3Q9NQW8 809 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 HSFX1Q9UBD0 423 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 FEZ2Q9UHY8 353 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 CYTH4Q9UIA0 394 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 ADAM28Q9UKQ2 775 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 MAFFQ9ULX9 164 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 DUSP12Q9UNI6 340 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 NME7Q9Y5B8 376 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 ZFP37Q9Y6Q3 630 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-207ENST00000471218 KIAA1671Q9BY89 1806 aa9.58□□□□□ -0.88
PTPRE-207ENST00000471218 E5RJQ4 531 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 PDE2AO00408 941 aaPredicted RBP9.57□□□□□ -0.88
PTPRE-207ENST00000471218 STK25O00506 426 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 SRGAP2O75044 1071 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 ERLIN1O75477 346 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 ZRANB2O95218 330 aaKnown RBP eCLIP9.57□□□□□ -0.88
PTPRE-207ENST00000471218 PDGFRBP09619 1106 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 H2AFXP16104 143 aaPredicted RBP9.57□□□□□ -0.88
PTPRE-207ENST00000471218 SDHBP21912 280 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 FGFR3P22607 806 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 PSMA2P25787 234 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 LMO2P25791 158 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 CHRNA3P32297 505 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 CREMQ03060 361 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 DHX34Q14147 1143 aaKnown RBP9.57□□□□□ -0.88
PTPRE-207ENST00000471218 MAP9Q49MG5 647 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 BOLA3Q53S33 107 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 RAB41Q5JT25 222 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 TEX35Q5T0J7 233 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 FAM102AQ5T9C2 384 aaPredicted RBP9.57□□□□□ -0.88
PTPRE-207ENST00000471218 ZNF280DQ6N043 979 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 PMF1Q6P1K2 205 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 SYDE1Q6ZW31 735 aaPredicted RBP9.57□□□□□ -0.88
PTPRE-207ENST00000471218 ANKS3Q6ZW76 656 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 STRADAQ7RTN6 431 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 ASCL5Q7RTU5 278 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms