RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CYP17A1P05093 508 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 SPATA31C1P0DKV0 1188 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 CYP11B2P19099 503 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 NAMPTP43490 491 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 TOB1P50616 345 aaPredicted RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 EFNA5P52803 228 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 CEBPZQ03701 1054 aaKnown RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 FAM160A1Q05DH4 1040 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 RAD51AP2Q09MP3 1159 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 STRN3Q13033 797 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 CUL4AQ13619 759 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 PDIA5Q14554 519 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 DHX8Q14562 1220 aaKnown RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 ZXDCQ2QGD7 858 aaPredicted RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 MGAT5BQ3V5L5 792 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 SLC39A12Q504Y0 691 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 SGO2Q562F6 1265 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 ARL6IP4Q66PJ3 421 aaKnown RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 LRRTM3Q86VH5 581 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 LSMEM2Q8N112 164 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 CACTIN-AS1Q8N1I8 211 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 PHTF2Q8N3S3 785 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 ARL14EPQ8N8R7 260 aaPredicted RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 IGSF22Q8N9C0 903 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 SH3RF2Q8TEC5 729 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 RFFLQ8WZ73 363 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 BICD1Q96G01 975 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 ACOX2Q99424 681 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 PLIN2Q99541 437 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 KIFC3Q9BVG8 833 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 ZHX3Q9H4I2 956 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 POLD4Q9HCU8 107 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 TRPC7Q9HCX4 862 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 EIF2B4Q9UI10 523 aaKnown RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 CSPG4Q6UVK1 2322 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 MN1Q10571 1320 aaPredicted RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 C2orf78A6NCI8 922 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 OR6C75A6NL08 312 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 MEI4A8MW99 385 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 KCNJ18B7U540 433 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 E9PMD0 336 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 H0Y8X5 98 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 H0YCG3 227 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 PPEF2O14830 753 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 TRIM24O15164 1050 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 BCAT2O15382 392 aaPredicted RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 STX6O43752 255 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 HIP1RO75146 1068 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 NDUFS2O75306 463 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 ZNF217O75362 1048 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 FAM13AO94988 1023 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 MT-CO3P00414 261 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 HARSP12081 509 aaKnown RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 NCAM1P13591 858 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 HOXB2P14652 356 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 KCNE1P15382 129 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 BRD2P25440 801 aaKnown RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 DDX6P26196 483 aaKnown RBP eCLIP6.27□□□□□ -1.41
VARS-222ENST00000470953 MARCKSP29966 332 aaPredicted RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 CDC25AP30304 524 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 RPL9P32969 192 aaKnown RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 LSSP48449 732 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 CCT8P50990 548 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 GUCY2FP51841 1108 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 SMTNP53814 917 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 YARSP54577 528 aaKnown RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 MLLT10P55197 1068 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 PEX3P56589 373 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 CYP4F2P78329 520 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 SPAG1Q07617 926 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 NR1H3Q13133 447 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 VEPH1Q14D04 833 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 STK38Q15208 465 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 TAF12Q16514 161 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 DCAF4L1Q3SXM0 396 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 ZNF568Q3ZCX4 644 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 HSF5Q4G112 596 aaPredicted RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 DCAF12L1Q5VU92 463 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 FOXD4L5Q5VV16 416 aaPredicted RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 OVOS1Q6IE37 1185 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 CXXC5Q7LFL8 322 aaKnown RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 GPBP1Q86WP2 473 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 GATAD2AQ86YP4 633 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 MCEMP1Q8IX19 187 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 ADGRG2Q8IZP9 1017 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 FOXD4L4Q8WXT5 416 aaPredicted RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 FOXJ1Q92949 421 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 TOE1Q96GM8 510 aaKnown RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 INTS4Q96HW7 963 aaKnown RBP6.27□□□□□ -1.41
VARS-222ENST00000470953 MRGPRX1Q96LB2 322 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 AK8Q96MA6 479 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 PNKPQ96T60 521 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 TCHPQ9BT92 498 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 FUCA2Q9BTY2 467 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 RUSC1Q9BVN2 902 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 TIPINQ9BVW5 301 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 GPR174Q9BXC1 333 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 POLR1BQ9H9Y6 1135 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 KMT5AQ9NQR1 393 aa6.27□□□□□ -1.41
VARS-222ENST00000470953 SLC38A7Q9NVC3 462 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms