RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ATP13A4Q4VNC1 1196 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 BOLA3Q53S33 107 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 LGSNQ5TDP6 509 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 FBXW10Q5XX13 1052 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 MTHFD1LQ6UB35 978 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 DPH6Q7L8W6 267 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 CCDC91Q7Z6B0 441 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 TRABD2AQ86V40 505 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 VSIG1Q86XK7 387 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 CDKL3Q8IVW4 592 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 ZSCAN1Q8NBB4 408 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 SLC4A11Q8NBS3 891 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 GDAP1Q8TB36 358 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 TEKT4Q8WW24 435 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 PRCCQ92733 491 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 APBB2Q92870 758 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 MCRS1Q96EZ8 462 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 ZNF560Q96MR9 790 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 RAB3IPQ96QF0 476 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 CPXM1Q96SM3 734 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 TBCBQ99426 244 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 FDXACB1Q9BRP7 624 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 PITPNM3Q9BZ71 974 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 GCOM2Q9BZD3 368 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 OSBPL7Q9BZF2 842 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 FHDC1Q9C0D6 1143 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 KLC2Q9H0B6 622 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 SLC40A1Q9NP59 571 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 TIMMDC1Q9NPL8 285 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 TXLNGQ9NUQ3 528 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 PAK5Q9P286 719 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 CTNNAL1Q9UBT7 734 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 PCSK1NQ9UHG2 260 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 XPO7Q9UIA9 1087 aaKnown RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 SIX4Q9UIU6 781 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 SLC12A4Q9UP95 1085 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 NOD1Q9Y239 953 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 SLC45A1Q9Y2W3 748 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 SBF1O95248 1867 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 PLXNB2O15031 1838 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CLUHO75153 1309 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 GPR25O00155 361 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 TM9SF1O15321 606 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CHADO15335 359 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 TP73O15350 636 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 LZTS3O60299 673 aaPredicted RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 TRUB2O95900 331 aaKnown RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 ZBED1O96006 694 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CD4P01730 458 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 INHBAP08476 426 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 GSTA2P09210 222 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 ZSCAN5DPP0CG00 497 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CYP2C8P10632 490 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 RBP3P10745 1247 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CETPP11597 493 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 NEFHP12036 1026 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 EZRP15311 586 aaKnown RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 PDGFRAP16234 1089 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 ARF4P18085 180 aaPredicted RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 AXLP30530 894 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 ACADSBP45954 432 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 RASSF2P50749 326 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 GTF2A1P52655 376 aaPredicted RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 NDST1P52848 882 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 GDF10P55107 478 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 ARHGAP1Q07960 439 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CCDC15Q0P6D6 951 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 XRCC4Q13426 336 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 MTFR1Q15390 333 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 ZKSCAN8Q15776 578 aaPredicted RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 TAZQ16635 292 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 DGKDQ16760 1214 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 RALGAPA2Q2PPJ7 1873 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 GOLGA7BQ2TAP0 167 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 RNF43Q68DV7 783 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 NOTUMQ6P988 496 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CYB5D1Q6P9G0 228 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 LCLAT1Q6UWP7 414 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 DPP9Q86TI2 863 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 UNC93AQ86WB7 457 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 TRIM42Q8IWZ5 723 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 WDTC1Q8N5D0 677 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 LRRC52Q8N7C0 313 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CEP120Q8N960 986 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CMASQ8NFW8 434 aaPredicted RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 NLGN2Q8NFZ4 835 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 OR6J1Q8NGC5 347 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 JOSD2Q8TAC2 188 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 SPATA18Q8TC71 538 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 COPS5Q92905 334 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CLMNQ96JQ2 1002 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 ZNF668Q96K58 619 aaPredicted RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 FGD4Q96M96 766 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CYTH2Q99418 400 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 TACO1Q9BSH4 297 aaKnown RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 TRIM6Q9C030 488 aaPredicted RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 ELOVL4Q9GZR5 314 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 IQCGQ9H095 443 aaKnown RBP8.33□□□□□ -1.08
SMC4-212ENST00000470240 PRDM16Q9HAZ2 1276 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms