RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 MMRN2Q9H8L6 949 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 DEC1Q9P2X7 70 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 MAPK8IP1Q9UQF2 711 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 TRAF3IP3Q9Y228 551 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 USP24Q9UPU5 2620 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 TCRBV21S2A2A0A5A6 115 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 PATE3B3GLJ2 98 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 KHNYNO15037 678 aaKnown RBP22.25■■□□□ 1.15
COL9A3-207ENST00000467819 KRT37O76014 449 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 KCNK5O95279 499 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 TRIM21P19474 475 aaKnown RBP22.25■■□□□ 1.15
COL9A3-207ENST00000467819 NR2F2P24468 414 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 P2RY2P41231 377 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 GCLMP48507 274 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 KRT85P78386 507 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 C10orf76Q5T2E6 689 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 ARMCX6Q7L4S7 300 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 FRMD1Q8N878 549 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 ZNF513Q8N8E2 541 aaPredicted RBP22.25■■□□□ 1.15
COL9A3-207ENST00000467819 PIGKQ92643 395 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 CCDC47Q96A33 483 aaKnown RBP22.25■■□□□ 1.15
COL9A3-207ENST00000467819 APOBEC3GQ9HC16 384 aaKnown RBP22.25■■□□□ 1.15
COL9A3-207ENST00000467819 ANGPTL2Q9UKU9 493 aa22.25■■□□□ 1.15
COL9A3-207ENST00000467819 ADAMTS9Q9P2N4 1935 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 TRIM24O15164 1050 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 CYP26A1O43174 497 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 MAP3K13O43283 966 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 KIF20AO95235 890 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 NDUFA8P51970 172 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 INCA1Q0VD86 236 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 PREPLQ4J6C6 727 aaPredicted RBP22.24■■□□□ 1.15
COL9A3-207ENST00000467819 PSAPL1Q6NUJ1 521 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 CLEC20AQ6ZU45 233 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 TERB1Q8NA31 727 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 TAS1R2Q8TE23 839 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 CYFIP2Q96F07 1278 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 KLF16Q9BXK1 252 aaPredicted RBP22.24■■□□□ 1.15
COL9A3-207ENST00000467819 OSER1Q9NX31 292 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 SCML2Q9UQR0 700 aa22.24■■□□□ 1.15
COL9A3-207ENST00000467819 ASCC3Q8N3C0 2202 aaKnown RBP22.23■■□□□ 1.15
COL9A3-207ENST00000467819 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 NEDD8-MDP1E9PL57 170 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 RHOBTB3O94955 611 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 CD58P19256 250 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 ACO1P21399 889 aaKnown RBP22.23■■□□□ 1.15
COL9A3-207ENST00000467819 PMLP29590 882 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 ATP5C1P36542 298 aaKnown RBP22.23■■□□□ 1.15
COL9A3-207ENST00000467819 WASP42768 502 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 PPP3CAQ08209 521 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 ST3GAL2Q16842 350 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 LPCAT2Q7L5N7 544 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 FAM186BQ8IYM0 893 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 TMEFF1Q8IYR6 380 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 HNRNPABQ99729 332 aaKnown RBP22.23■■□□□ 1.15
COL9A3-207ENST00000467819 DUSP9Q99956 384 aaKnown RBP22.23■■□□□ 1.15
COL9A3-207ENST00000467819 NT5C1AQ9BXI3 368 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 DNAJC17Q9NVM6 304 aaKnown RBP22.23■■□□□ 1.15
COL9A3-207ENST00000467819 NUDT5Q9UKK9 219 aa22.23■■□□□ 1.15
COL9A3-207ENST00000467819 HHLA1C9JL84 531 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 MDM4O15151 490 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 MAPK13O15264 365 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 KRT13P13646 458 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 GOLGA8FQ08AF8 430 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 GOLGA8DPQ0D2H9 430 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 DAB2IPQ5VWQ8 1189 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 GRAMD4Q6IC98 578 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 TPGS1Q6ZTW0 290 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 NUDT18Q6ZVK8 323 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 HTR3DQ70Z44 454 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 INTS8Q75QN2 995 aaKnown RBP22.22■■□□□ 1.15
COL9A3-207ENST00000467819 TRMT11Q7Z4G4 463 aaKnown RBP22.22■■□□□ 1.15
COL9A3-207ENST00000467819 BBS2Q9BXC9 721 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 NIF3L1Q9GZT8 377 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 CYP3A43Q9HB55 503 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 NMUR1Q9HB89 426 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 TMEM9BQ9NQ34 198 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 CYLDQ9NQC7 956 aa22.22■■□□□ 1.15
COL9A3-207ENST00000467819 MBD1Q9UIS9 605 aaPredicted RBP22.22■■□□□ 1.15
COL9A3-207ENST00000467819 LSM7Q9UK45 103 aaKnown RBP22.22■■□□□ 1.15
COL9A3-207ENST00000467819 A0A1W2PQH9 124 aa22.21■■□□□ 1.15
COL9A3-207ENST00000467819 GREM1O60565 184 aa22.21■■□□□ 1.15
COL9A3-207ENST00000467819 NOVA1P51513 510 aaKnown RBP22.21■■□□□ 1.15
COL9A3-207ENST00000467819 IRX4P78413 519 aa22.21■■□□□ 1.15
COL9A3-207ENST00000467819 DPYDQ12882 1025 aa22.21■■□□□ 1.15
COL9A3-207ENST00000467819 NFIL3Q16649 462 aa22.21■■□□□ 1.15
COL9A3-207ENST00000467819 MAP7D1Q3KQU3 841 aa22.21■■□□□ 1.15
COL9A3-207ENST00000467819 MIB1Q86YT6 1006 aa22.21■■□□□ 1.15
COL9A3-207ENST00000467819 ZDHHC9Q9Y397 364 aa22.21■■□□□ 1.15
COL9A3-207ENST00000467819 PCDHA5Q9Y5H7 936 aa22.21■■□□□ 1.15
COL9A3-207ENST00000467819 GIPC1O14908 333 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 CILPO75339 1184 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 RARGP13631 454 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 HOXB2P14652 356 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 TYRP14679 529 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 PSMC2P35998 433 aaKnown RBP22.2■■□□□ 1.14
COL9A3-207ENST00000467819 PTGER3P43115 390 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 BYSLQ13895 437 aaKnown RBP22.2■■□□□ 1.14
COL9A3-207ENST00000467819 C10orf120Q5SQS8 335 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 EGFLAMQ63HQ2 1017 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 KCNV2Q8TDN2 545 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms