RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 RSRC2Q7L4I2 434 aaKnown RBP4.8□□□□□ -1.64
SMC4-208ENST00000467468 RD3Q7Z3Z2 195 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 TMTC1Q8IUR5 882 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 CCDC28AQ8IWP9 274 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 SMCR8Q8TEV9 937 aaPredicted RBP4.8□□□□□ -1.64
SMC4-208ENST00000467468 RAPGEF4Q8WZA2 1011 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 PYM1Q9BRP8 204 aaKnown RBP4.8□□□□□ -1.64
SMC4-208ENST00000467468 TMX4Q9H1E5 349 aaPredicted RBP4.8□□□□□ -1.64
SMC4-208ENST00000467468 FAM83DQ9H4H8 585 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 RASSF1Q9NS23 344 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 KLC4Q9NSK0 619 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 GGA3Q9NZ52 723 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 FOXJ2Q9P0K8 574 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 KIF17Q9P2E2 1029 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 DKK4Q9UBT3 224 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 ZMYND8Q9ULU4 1186 aaPredicted RBP4.8□□□□□ -1.64
SMC4-208ENST00000467468 DTNAQ9Y4J8 743 aa4.8□□□□□ -1.64
SMC4-208ENST00000467468 SPATA31A6Q5VVP1 1343 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 AQP7P3A6NL99 342 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 H7C4K7 107 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 GCOM1H8Y6P7 765 aaPredicted RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 URI1O94763 535 aaPredicted RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 CHRM2P08172 466 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 MST1P26927 711 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 SLC5A2P31639 672 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 ADD2P35612 726 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 GRIA3P42263 894 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 PNLIPRP1P54315 467 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 LOXL3P58215 753 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 NSUN2Q08J23 767 aaKnown RBP eCLIP4.79□□□□□ -1.64
SMC4-208ENST00000467468 G3BP1Q13283 466 aaKnown RBP eCLIP4.79□□□□□ -1.641e-39■■■■■ 140
SMC4-208ENST00000467468 TXNRD1Q16881 649 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 FAM110CQ1W6H9 321 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 PLAC9Q5JTB6 97 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 AKNAD1Q5T1N1 836 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 RBM20Q5T481 1227 aaKnown RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 DPY19L2P1Q6NXN4 242 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 KLHL17Q6TDP4 642 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 C1orf122Q6ZSJ8 110 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 PEG10Q86TG7 708 aaKnown RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 HERC6Q8IVU3 1022 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 FTSJ3Q8IY81 847 aaKnown RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 BOLLQ8N9W6 283 aaKnown RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 ATRIPQ8WXE1 791 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 ASB12Q8WXK4 309 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 THAP4Q8WY91 577 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 HERVK_113Q902F9 699 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 TFAP2BQ92481 460 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 RUBCNQ92622 972 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 FKBP10Q96AY3 582 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 FAM136AQ96C01 138 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 PBKQ96KB5 322 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 SEC62Q99442 399 aaKnown RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 DDX23Q9BUQ8 820 aaKnown RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 ACTRT3Q9BYD9 372 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 TP63Q9H3D4 680 aaPredicted RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 MLXIPQ9HAP2 919 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 MRPS18AQ9NVS2 196 aaKnown RBP4.79□□□□□ -1.64
SMC4-208ENST00000467468 ZSCAN32Q9NX65 697 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 PTGFRNQ9P2B2 879 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 SLC13A4Q9UKG4 626 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 TBC1D30Q9Y2I9 924 aa4.79□□□□□ -1.64
SMC4-208ENST00000467468 SALL3Q9BXA9 1300 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 B9A039 149 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 PCDH17O14917 1159 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 DCLK1O15075 740 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 ACTL6BO94805 426 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 NXPH3O95157 252 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 MBD4O95243 580 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 C1RP00736 705 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 POLBP06746 335 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 LDHCP07864 332 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 PECAM1P16284 738 aaPredicted RBP4.78□□□□□ -1.64
SMC4-208ENST00000467468 CD38P28907 300 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 PTDSS1P48651 473 aaKnown RBP4.78□□□□□ -1.64
SMC4-208ENST00000467468 CLK3P49761 638 aaKnown RBP4.78□□□□□ -1.64
SMC4-208ENST00000467468 PAPOLAP51003 745 aaKnown RBP4.78□□□□□ -1.64
SMC4-208ENST00000467468 EIF5P55010 431 aaKnown RBP4.78□□□□□ -1.64
SMC4-208ENST00000467468 SOX10P56693 466 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 TLE2Q04725 743 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 IQCB1Q15051 598 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 FAM153CQ494X1 144 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 PLA1AQ53H76 456 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 FAXCQ5TGI0 409 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 FBXO42Q6P3S6 717 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 C2CD5Q86YS7 1000 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 CPOQ8IVL8 374 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 ESX1Q8N693 406 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 RSC1A1Q92681 617 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 UROC1Q96N76 676 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 SLC46A1Q96NT5 459 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 RTKNQ9BST9 563 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 SLC26A6Q9BXS9 759 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 TTYH3Q9C0H2 523 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 PABPC3Q9H361 631 aaKnown RBP4.78□□□□□ -1.64
SMC4-208ENST00000467468 SMOC2Q9H3U7 446 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 ZBTB26Q9HCK0 441 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 UBN1Q9NPG3 1134 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 RIC8AQ9NPQ8 531 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 PRDM8Q9NQV8 689 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms