RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 BROXQ5VW32 411 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 VSTM1Q6UX27 236 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 C4orf50Q6ZRC1 276 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 SCFD1Q8WVM8 642 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 DUSP9Q99956 384 aaKnown RBP15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 SPHK2Q9NRA0 654 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 DNAJC17Q9NVM6 304 aaKnown RBP15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 NXF1Q9UBU9 619 aaKnown RBP15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 IL17BQ9UHF5 180 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 ANKRD6Q9Y2G4 727 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 MYH11P35749 1972 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 ENC1O14682 589 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 TRIM66O15016 1216 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 STX6O43752 255 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 HUS1O60921 280 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 ABL1P00519 1130 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 IGLV3-19P01714 112 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 PCSK1P29120 753 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 GRIK1P39086 918 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 TPMTP51580 245 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 RAD51AP2Q09MP3 1159 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 ZNF174Q15697 407 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 FUT11Q495W5 492 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 ARHGAP40Q5TG30 622 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 USP49Q70CQ1 688 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 PRICKLE2Q7Z3G6 844 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 TMEM25Q86YD3 366 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 ZNF248Q8NDW4 579 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 ZFRQ96KR1 1074 aaKnown RBP15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 GBP4Q96PP9 640 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 PCED1AQ9H1Q7 454 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 SLCO1B1Q9Y6L6 691 aa15.66■□□□□ 0.1
HMGXB4-206ENST00000466438 PRRT4C9JH25 899 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 H0Y8X5 98 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 JAK2O60674 1132 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 GRIA4P48058 902 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 ACOT2P49753 483 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 NOP14P78316 857 aaKnown RBP15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 STARD3Q14849 445 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 FAM171BQ6P995 826 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 FBXL19Q6PCT2 694 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 BBS7Q8IWZ6 715 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 NUP58Q9BVL2 599 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 MKRN2Q9H000 416 aaKnown RBP15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 CPNE5Q9HCH3 593 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 OSGEPQ9NPF4 335 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 LARSQ9P2J5 1176 aaKnown RBP15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 MAGEC2Q9UBF1 373 aaPredicted RBP15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 SH3BP1Q9Y3L3 701 aa15.65■□□□□ 0.1
HMGXB4-206ENST00000466438 MYLKQ15746 1914 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 WASH3PC4AMC7 463 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 H3BQV1 296 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 KCNK3O14649 394 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 CACNG3O60359 315 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 SYT1P21579 422 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 SCP2P22307 547 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 ANXA13P27216 316 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 ADSSP30520 456 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 LHX1P48742 406 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 ACADVLP49748 655 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 ZNF132P52740 706 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 TRIM29Q14134 588 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 SLC39A4Q6P5W5 647 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 KCNK18Q7Z418 384 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 OSTM1Q86WC4 334 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 IGSF22Q8N9C0 903 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 KRI1Q8N9T8 703 aaKnown RBP15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 SNX19Q92543 992 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 XPO6Q96QU8 1125 aaKnown RBP15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 RAB34Q9BZG1 259 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 ATP6V1DQ9Y5K8 247 aa15.64■□□□□ 0.09
HMGXB4-206ENST00000466438 VPS37CA5D8V6 355 aaPredicted RBP15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 LAD1O00515 517 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 GABRDO14764 452 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 HCRTO43612 131 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 DFNA5O60443 496 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 LDOC1O95751 146 aaPredicted RBP15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 BDNFP23560 247 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 PCBP4P57723 403 aaKnown RBP15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 IL9RQ01113 521 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 TAF10Q12962 218 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 DNAJC3Q13217 504 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 ORC1Q13415 861 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 NT5DC4Q86YG4 428 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 ADGRF2Q8IZF7 708 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 CACTIN-AS1Q8N1I8 211 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 SNRNP27Q8WVK2 155 aaKnown RBP15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 MYLPFQ96A32 169 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 SIPA1Q96FS4 1042 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 CNDP2Q96KP4 475 aaKnown RBP15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 SLITRK1Q96PX8 696 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 TM9SF3Q9HD45 589 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 STON1Q9Y6Q2 735 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 DOPEY2Q9Y3R5 2298 aa15.63■□□□□ 0.09
HMGXB4-206ENST00000466438 MYO9AB2RTY4 2548 aa15.62■□□□□ 0.09
HMGXB4-206ENST00000466438 CBX4O00257 560 aa15.62■□□□□ 0.09
HMGXB4-206ENST00000466438 ZSCAN22P10073 491 aaPredicted RBP15.62■□□□□ 0.09
HMGXB4-206ENST00000466438 POLR2BP30876 1174 aaKnown RBP15.62■□□□□ 0.09
HMGXB4-206ENST00000466438 CTSKP43235 329 aa15.62■□□□□ 0.09
HMGXB4-206ENST00000466438 FOSBP53539 338 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms