RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TMEM176AQ96HP8 235 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 DUSP15Q9H1R2 295 aaPredicted RBP19.88■□□□□ 0.77
SF3A1-205ENST00000463818 CISHQ9NSE2 258 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 NUDT5Q9UKK9 219 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 INVSQ9Y283 1065 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 TBC1D3BA6NDS4 549 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 SLC30A4O14863 429 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 SLC16A3O15427 465 aaKnown RBP19.87■□□□□ 0.77
SF3A1-205ENST00000463818 HOXC11O43248 304 aaPredicted RBP19.87■□□□□ 0.77
SF3A1-205ENST00000463818 KLF8O95600 359 aaPredicted RBP19.87■□□□□ 0.77
SF3A1-205ENST00000463818 ZNF806P0C7X5 589 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 PMS1P54277 932 aaKnown RBP19.87■□□□□ 0.77
SF3A1-205ENST00000463818 SF3A2Q15428 464 aaKnown RBP19.87■□□□□ 0.77
SF3A1-205ENST00000463818 ANO4Q32M45 955 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 USP39Q53GS9 565 aaKnown RBP19.87■□□□□ 0.77
SF3A1-205ENST00000463818 TCERG1LQ5VWI1 586 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 ANO7Q6IWH7 933 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 TMEM92Q6UXU6 159 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 SCD5Q86SK9 330 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 TTC30AQ86WT1 665 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 ETFBKMTQ8IXQ9 262 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 PHTF2Q8N3S3 785 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 IL17RCQ8NAC3 791 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 SLC4A11Q8NBS3 891 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 TXNDC5Q8NBS9 432 aaKnown RBP19.87■□□□□ 0.77
SF3A1-205ENST00000463818 TIGD1Q96MW7 591 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 TPSD1Q9BZJ3 242 aa19.87■□□□□ 0.77
SF3A1-205ENST00000463818 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.87■□□□□ 0.77
SF3A1-205ENST00000463818 SGK1O00141 431 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 MDM4O15151 490 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 TULP3O75386 442 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 RHOBTB1O94844 696 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 CHRM1P11229 460 aaPredicted RBP19.86■□□□□ 0.77
SF3A1-205ENST00000463818 HNRNPLP14866 589 aaKnown RBP eCLIP19.86■□□□□ 0.77
SF3A1-205ENST00000463818 KIR2DL1P43626 348 aaPredicted RBP19.86■□□□□ 0.77
SF3A1-205ENST00000463818 PLA2G4AP47712 749 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 RAD23BP54727 409 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 HSF5Q4G112 596 aaPredicted RBP19.86■□□□□ 0.77
SF3A1-205ENST00000463818 CBWD6Q4V339 395 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 DCAF17Q5H9S7 520 aaPredicted RBP19.86■□□□□ 0.77
SF3A1-205ENST00000463818 CBWD3Q5JTY5 395 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 CBWD5Q5RIA9 395 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 C10orf120Q5SQS8 335 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 KLHDC10Q6PID8 442 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 RASSF3Q86WH2 238 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 ZC3H3Q8IXZ2 948 aaKnown RBP19.86■□□□□ 0.77
SF3A1-205ENST00000463818 ARID3AQ99856 593 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 GTPBP4Q9BZE4 634 aaKnown RBP19.86■□□□□ 0.77
SF3A1-205ENST00000463818 DEC1Q9P2X7 70 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 HOOK1Q9UJC3 728 aaKnown RBP19.86■□□□□ 0.77
SF3A1-205ENST00000463818 DNMT3LQ9UJW3 386 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 NAGPAQ9UK23 515 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 LSM7Q9UK45 103 aaKnown RBP19.86■□□□□ 0.77
SF3A1-205ENST00000463818 COQ4Q9Y3A0 265 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 PCDHGA5Q9Y5G8 931 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 USP3Q9Y6I4 520 aa19.86■□□□□ 0.77
SF3A1-205ENST00000463818 DNAH14Q0VDD8 3507 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 PSEN1P49768 467 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 GOLGA8FQ08AF8 430 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 GOLGA8DPQ0D2H9 430 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 ELF2Q15723 593 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 AASDHQ4L235 1098 aaPredicted RBP19.85■□□□□ 0.77
SF3A1-205ENST00000463818 EOGTQ5NDL2 527 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 PLA2G2CQ5R387 149 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 ISM2Q6H9L7 571 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 CCDC186Q7Z3E2 898 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 C12orf50Q8NA57 414 aaPredicted RBP19.85■□□□□ 0.77
SF3A1-205ENST00000463818 CNOT6LQ96LI5 555 aaKnown RBP19.85■□□□□ 0.77
SF3A1-205ENST00000463818 UBXN6Q9BZV1 441 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 SMOC1Q9H4F8 434 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 ZDHHC4Q9NPG8 344 aa19.85■□□□□ 0.77
SF3A1-205ENST00000463818 ARMCX3Q9UH62 379 aaPredicted RBP19.85■□□□□ 0.77
SF3A1-205ENST00000463818 TRIM49BA6NDI0 452 aa19.84■□□□□ 0.77
SF3A1-205ENST00000463818 TRIM24O15164 1050 aa19.84■□□□□ 0.77
SF3A1-205ENST00000463818 ALDH1A2O94788 518 aa19.84■□□□□ 0.77
SF3A1-205ENST00000463818 GBP1P32455 592 aa19.84■□□□□ 0.77
SF3A1-205ENST00000463818 LRRC63Q05C16 580 aa19.84■□□□□ 0.77
SF3A1-205ENST00000463818 PREPLQ4J6C6 727 aaPredicted RBP19.84■□□□□ 0.77
SF3A1-205ENST00000463818 ARHGAP17Q68EM7 881 aa19.84■□□□□ 0.77
SF3A1-205ENST00000463818 TPGS1Q6ZTW0 290 aa19.84■□□□□ 0.77
SF3A1-205ENST00000463818 NUDT18Q6ZVK8 323 aa19.84■□□□□ 0.77
SF3A1-205ENST00000463818 ZNF276Q8N554 614 aa19.84■□□□□ 0.77
SF3A1-205ENST00000463818 FAM124BQ9H5Z6 455 aaPredicted RBP19.84■□□□□ 0.77
SF3A1-205ENST00000463818 HELZP42694 1942 aaKnown RBP19.84■□□□□ 0.77
SF3A1-205ENST00000463818 ADAM23O75077 832 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 RALAP11233 206 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 MPLP40238 635 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 CUL2Q13617 745 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 TADA2BQ86TJ2 420 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 PIGZQ86VD9 579 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 ANKRD52Q8NB46 1076 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 MDGA1Q8NFP4 955 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 KCNV2Q8TDN2 545 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 DHTKD1Q96HY7 919 aaPredicted RBP19.83■□□□□ 0.77
SF3A1-205ENST00000463818 BBS2Q9BXC9 721 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 POLMQ9NP87 494 aaPredicted RBP19.83■□□□□ 0.77
SF3A1-205ENST00000463818 VPS45Q9NRW7 570 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 RXFP3Q9NSD7 469 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 CLIC5Q9NZA1 410 aa19.83■□□□□ 0.77
SF3A1-205ENST00000463818 WDR35Q9P2L0 1181 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms