RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 POLMQ9NP87 494 aaPredicted RBP9.4□□□□□ -0.9
DDX39B-216ENST00000462421 CNGB3Q9NQW8 809 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 ARHGEF4Q9NR80 690 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 R4GN57 208 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 SLC12A8A0AV02 714 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 KCNJ18B7U540 433 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 PROB1E7EW31 1015 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 NEDD8-MDP1E9PL57 170 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 TNFRSF10BO14763 440 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 RNF40O75150 1001 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 LETM1O95202 739 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-216ENST00000462421 APBB3O95704 486 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 HMBSP08397 361 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 CHRNB1P11230 501 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 SDHBP21912 280 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 EEF1GP26641 437 aaKnown RBP9.39□□□□□ -0.91
DDX39B-216ENST00000462421 EIF2DP41214 584 aaKnown RBP9.39□□□□□ -0.91
DDX39B-216ENST00000462421 GRIA2P42262 883 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 SLC11A2P49281 568 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 GALK1P51570 392 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 KDSRQ06136 332 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 RAPGEF1Q13905 1077 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 KCNJ12Q14500 433 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 DHCR24Q15392 516 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 ELF2Q15723 593 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 HSF5Q4G112 596 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-216ENST00000462421 TMEM196Q5HYL7 178 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 EOGTQ5NDL2 527 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 CCDC183Q5T5S1 534 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 HEATR6Q6AI08 1181 aaKnown RBP9.39□□□□□ -0.91
DDX39B-216ENST00000462421 LONP2Q86WA8 852 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 UNC45BQ8IWX7 931 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 CAMKK1Q8N5S9 505 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 TSTD1Q8NFU3 115 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 RPLP0P6Q8NHW5 317 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 UBA3Q8TBC4 463 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 RUBCNQ92622 972 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 MED15Q96RN5 788 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 SLC22A12Q96S37 553 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 CRACR2AQ9BSW2 395 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 BBS2Q9BXC9 721 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 CYLDQ9NQC7 956 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 HPS4Q9NQG7 708 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 PRMT8Q9NR22 394 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-216ENST00000462421 SPHK2Q9NRA0 654 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 ABCC13Q9NSE7 274 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 RBM12Q9NTZ6 932 aaKnown RBP9.39□□□□□ -0.91
DDX39B-216ENST00000462421 DNAJC17Q9NVM6 304 aaKnown RBP9.39□□□□□ -0.91
DDX39B-216ENST00000462421 MARCH2Q9P0N8 246 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 APEX2Q9UBZ4 518 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 SLC12A6Q9UHW9 1150 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 NME7Q9Y5B8 376 aa9.39□□□□□ -0.91
DDX39B-216ENST00000462421 FAM92AA1XBS5 289 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 GTPBP10A4D1E9 387 aaKnown RBP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 PRR23AA6NEV1 266 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 NRG2O14511 850 aaPredicted RBP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 FOXD2O60548 495 aaPredicted RBP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 BEST1O76090 585 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 OLFM2O95897 454 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 APOEP02649 317 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 CYP17A1P05093 508 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 CORO1AP31146 461 aaKnown RBP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 MRPS21P82921 87 aaKnown RBP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 PDE4CQ08493 712 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 SIM2Q14190 667 aaPredicted RBP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 STARD3Q14849 445 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 CNGA2Q16280 664 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 DPCR1Q3MIW9 517 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 FILIP1LQ4L180 1135 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 VWA3BQ502W6 1294 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 USP39Q53GS9 565 aaKnown RBP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 NUGGCQ68CJ6 796 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 SMYD5Q6GMV2 418 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 TRIM65Q6PJ69 517 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 LRSAM1Q6UWE0 723 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 LCLAT1Q6UWP7 414 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 MAMSTRQ6ZN01 415 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 TPGS1Q6ZTW0 290 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 PAQR9Q6ZVX9 377 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 FMNL3Q8IVF7 1028 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 ZMIZ2Q8NF64 920 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 DDI1Q8WTU0 396 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 IRGQQ8WZA9 623 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 RNF34Q969K3 372 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 HSFY1Q96LI6 401 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 TUBGCP2Q9BSJ2 902 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 ULBP1Q9BZM6 244 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 RNF38Q9H0F5 515 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 NDST4Q9H3R1 872 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 IL37Q9NZH6 218 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 DLGAP2Q9P1A6 1054 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 USP18Q9UMW8 372 aa9.38□□□□□ -0.91
DDX39B-216ENST00000462421 SMG5Q9UPR3 1016 aaKnown RBP9.38□□□□□ -0.91
DDX39B-216ENST00000462421 DOCK8Q8NF50 2099 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 SMTNL1A8MU46 457 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms