RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 GOLGA8IPA6NC78 632 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 TRIM49BA6NDI0 452 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 CASTOR2A6NHX0 329 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 GOLGA8JA6NMD2 632 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 LRRIQ3A6PVS8 624 aaPredicted RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 NT5C1B-RDH14C9J2C7 533 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 GOLGA6L22H0YM25 854 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 PSMA7O14818 248 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 CLIC2O15247 247 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 NCK2O43639 380 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 CALUO43852 315 aaPredicted RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 B3GAT3O94766 335 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 ABLIM3O94929 683 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 VNN1O95497 513 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 VNN2O95498 520 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 ASS1P00966 412 aaKnown RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 RPL13P26373 211 aaKnown RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 PNPLA4P41247 253 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 LIG3P49916 1009 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 CLCN4P51793 760 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 KRT17Q04695 432 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 RNASELQ05823 741 aaKnown RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 TNK2Q07912 1038 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 PPP3CAQ08209 521 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 BFSP1Q12934 665 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 ADAM9Q13443 819 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 SEPT6Q14141 434 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 USP41Q3LFD5 358 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 DPCR1Q3MIW9 517 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 TCEAL5Q5H9L2 206 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 TDRD10Q5VZ19 366 aaKnown RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 DPY19L2P1Q6NXN4 242 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 RSPO2Q6UXX9 243 aaPredicted RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 INTS8Q75QN2 995 aaKnown RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 DPH6Q7L8W6 267 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 TRAPPC11Q7Z392 1133 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 FRMD5Q7Z6J6 570 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 FILIP1Q7Z7B0 1213 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 ADGRD2Q7Z7M1 963 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 TRIM59Q8IWR1 403 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 VPS52Q8N1B4 723 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 CMASQ8NFW8 434 aaPredicted RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 LMO3Q8TAP4 145 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 PIWIL2Q8TC59 973 aaKnown RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 PABPC5Q96DU9 382 aaKnown RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 ALPK1Q96QP1 1244 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 RTP3Q9BQQ7 232 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 CLSTN3Q9BQT9 956 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 PCIF1Q9H4Z3 704 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 CERS4Q9HA82 394 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS36-202ENST00000462289 DPP3Q9NY33 737 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 CLEC1BQ9P126 229 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 HSFX1Q9UBD0 423 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 TJP2Q9UDY2 1190 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 PUF60Q9UHX1 559 aaKnown RBP6.17□□□□□ -1.42
VPS36-202ENST00000462289 MTUS1Q9ULD2 1270 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 MAFFQ9ULX9 164 aa6.17□□□□□ -1.42
VPS36-202ENST00000462289 NUP210Q8TEM1 1887 aaPredicted RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 P4HA2O15460 535 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 TEX28O15482 410 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 EXOC3O60645 756 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 CLASP2O75122 1294 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 TBX10O75333 385 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 TACC1O75410 805 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 CBX7O95931 251 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 CNPP09543 421 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 HARSP12081 509 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 FOSL2P15408 326 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 ZNF18P17022 549 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 TKTP29401 623 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 HOXA9P31269 272 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 ATICP31939 592 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 PSMC2P35998 433 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 BRCC3P46736 316 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 OR1G1P47890 313 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 GLUD2P49448 558 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 CYP2J2P51589 502 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 GUCY2FP51841 1108 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 DLG4P78352 724 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 CREMQ03060 361 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 SPAG1Q07617 926 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 PAK1Q13153 545 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 RAB33AQ14088 237 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 SMC1AQ14683 1233 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 NCAPHQ15003 741 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 CAMK4Q16566 473 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 CCDC183Q5T5S1 534 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 SLC6A19Q695T7 634 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 PDXDC1Q6P996 788 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 ANKS3Q6ZW76 656 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 APTXQ7Z2E3 356 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 MCATQ8IVS2 390 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 UBR7Q8N806 425 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 SMRP1Q8NCR6 262 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 MAFAQ8NHW3 353 aaPredicted RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 ENOX1Q8TC92 643 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 CACTINQ8WUQ7 758 aaKnown RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 KBTBD7Q8WVZ9 684 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 NELFBQ8WX92 580 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms