RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 GAREM1Q9H706 876 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 TM7SF3Q9NS93 570 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 DNAJC17Q9NVM6 304 aaKnown RBP12.59□□□□□ -0.39
HCFC1-204ENST00000461098 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
HCFC1-204ENST00000461098 SEL1LQ9UBV2 794 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 EXOC7Q9UPT5 735 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 MGAQ8IWI9 3026 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 MAST4O15021 2626 aa12.58□□□□□ -0.39
HCFC1-204ENST00000461098 FAM92AA1XBS5 289 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 EIF4E1BA6NMX2 242 aaKnown RBP12.58□□□□□ -0.4
HCFC1-204ENST00000461098 TACC1O75410 805 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 GNL1P36915 607 aaPredicted RBP12.58□□□□□ -0.4
HCFC1-204ENST00000461098 TUBP50607 506 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 HLA-BQ31612 363 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 HECTD3Q5T447 861 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 GRAMD4Q6IC98 578 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 PAQR9Q6ZVX9 377 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 HTR3DQ70Z44 454 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 ZCCHC9Q8N567 271 aaKnown RBP12.58□□□□□ -0.4
HCFC1-204ENST00000461098 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 FBXO32Q969P5 355 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 TOE1Q96GM8 510 aaKnown RBP12.58□□□□□ -0.4
HCFC1-204ENST00000461098 ANKRD36BP1Q96IX9 119 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 EPSTI1Q96J88 318 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 ELOVL4Q9GZR5 314 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 MKRN2Q9H000 416 aaKnown RBP12.58□□□□□ -0.4
HCFC1-204ENST00000461098 ITM2CQ9NQX7 267 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 OLFML3Q9NRN5 406 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 BTBD3Q9Y2F9 522 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 SH3BP1Q9Y3L3 701 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 SLCO1B1Q9Y6L6 691 aa12.58□□□□□ -0.4
HCFC1-204ENST00000461098 GOLGA4Q13439 2230 aaKnown RBP12.58□□□□□ -0.4
HCFC1-204ENST00000461098 FAM149AA5PLN7 773 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 CYSRT1A8MQ03 144 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 NEDD8-MDP1E9PL57 170 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 GFRA2O00451 464 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 GCNT3O95395 438 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 FAM163BP0C2L3 166 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 IRF1P10914 325 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 NCAM1P13591 858 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 TYRP14679 529 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 SMAD1Q15797 465 aaKnown RBP12.57□□□□□ -0.4
HCFC1-204ENST00000461098 PTPRNQ16849 979 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 DUOXA2Q1HG44 320 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 FUT11Q495W5 492 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 SDE2Q6IQ49 451 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
HCFC1-204ENST00000461098 NUDT18Q6ZVK8 323 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 CBWD2Q8IUF1 395 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 GPD1LQ8N335 351 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 CADM4Q8NFZ8 388 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 UBL7Q96S82 380 aaPredicted RBP12.57□□□□□ -0.4
HCFC1-204ENST00000461098 GPR174Q9BXC1 333 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 PRDM16Q9HAZ2 1276 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 MARK1Q9P0L2 795 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 FBXO10Q9UK96 956 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 PCDHGB2Q9Y5G2 931 aa12.57□□□□□ -0.4
HCFC1-204ENST00000461098 KNL1Q8NG31 2342 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 FRMD3A2A2Y4 597 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 METTL12A8MUP2 240 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 RTN3O95197 1032 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-204ENST00000461098 CER1O95813 267 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 TBX18O95935 607 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 GAP43P17677 238 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 MATKP42679 507 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 SLC5A3P53794 718 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 ENPP2Q13822 863 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 TPGS1Q6ZTW0 290 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 TRAPPC11Q7Z392 1133 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 GALNT15Q8N3T1 639 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 B3GALNT2Q8NCR0 500 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 RHBDD1Q8TEB9 315 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 NOC3LQ8WTT2 800 aaKnown RBP12.56□□□□□ -0.4
HCFC1-204ENST00000461098 BBS2Q9BXC9 721 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 KLF16Q9BXK1 252 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-204ENST00000461098 MIR1-1HGQ9H1L0 117 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 SNX25Q9H3E2 840 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 GMIPQ9P107 970 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 STON1Q9Y6Q2 735 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 TMEM131Q92545 1883 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 CABIN1Q9Y6J0 2220 aa12.56□□□□□ -0.4
HCFC1-204ENST00000461098 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
HCFC1-204ENST00000461098 MEI4A8MW99 385 aa12.55□□□□□ -0.4
HCFC1-204ENST00000461098 TK2O00142 265 aa12.55□□□□□ -0.4
HCFC1-204ENST00000461098 BCAT2O15382 392 aaPredicted RBP12.55□□□□□ -0.4
HCFC1-204ENST00000461098 FLRT2O43155 660 aa12.55□□□□□ -0.4
HCFC1-204ENST00000461098 ZBTB24O43167 697 aaPredicted RBP12.55□□□□□ -0.4
HCFC1-204ENST00000461098 PRPF6O94906 941 aaKnown RBP12.55□□□□□ -0.4
HCFC1-204ENST00000461098 IGLV3-19P01714 112 aa12.55□□□□□ -0.4
HCFC1-204ENST00000461098 TNNC2P02585 160 aa12.55□□□□□ -0.4
HCFC1-204ENST00000461098 ITPKBP27987 946 aa12.55□□□□□ -0.4
HCFC1-204ENST00000461098 HOXD13P35453 343 aa12.55□□□□□ -0.4
HCFC1-204ENST00000461098 TPMTP51580 245 aa12.55□□□□□ -0.4
HCFC1-204ENST00000461098 WDR49Q8IV35 697 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms