RNA–Protein interactions for RNA: ENST00000460331.5

ZNF3-211, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-211ENST00000460331 NDRG1Q92597 394 aaKnown RBP13.05□□□□□ -0.32
ZNF3-211ENST00000460331 MRPS31Q92665 395 aaKnown RBP13.05□□□□□ -0.32
ZNF3-211ENST00000460331 ALS2CR12Q96Q35 445 aa13.05□□□□□ -0.32
ZNF3-211ENST00000460331 SLC2A13Q96QE2 648 aa13.05□□□□□ -0.32
ZNF3-211ENST00000460331 DDX23Q9BUQ8 820 aaKnown RBP13.05□□□□□ -0.32
ZNF3-211ENST00000460331 OSGEPQ9NPF4 335 aa13.05□□□□□ -0.32
ZNF3-211ENST00000460331 DNMT3BQ9UBC3 853 aaKnown RBP13.05□□□□□ -0.32
ZNF3-211ENST00000460331 ZMYM5Q9UJ78 669 aa13.05□□□□□ -0.32
ZNF3-211ENST00000460331 TFR2Q9UP52 801 aa13.05□□□□□ -0.32
ZNF3-211ENST00000460331 DUSP10Q9Y6W6 482 aa13.05□□□□□ -0.32
ZNF3-211ENST00000460331 C2CD4BA6NLJ0 364 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 SOBPA7XYQ1 873 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 DPYSL4O14531 572 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 KIF5CO60282 957 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 RNF8O76064 485 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 RARGP13631 454 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 PFKLP17858 780 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 PSMA2P25787 234 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 GABRR2P28476 465 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 SLC1A1P43005 524 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 PTPN9P43378 593 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 TUBP50607 506 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 ZNF143P52747 638 aaPredicted RBP13.04□□□□□ -0.32
ZNF3-211ENST00000460331 EPHA5P54756 1037 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 RPL7AP62424 266 aaKnown RBP13.04□□□□□ -0.32
ZNF3-211ENST00000460331 ITIH3Q06033 890 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 TAF5Q15542 800 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 HECTD3Q5T447 861 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 CES5AQ6NT32 575 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 EP400NLQ6ZTU2 488 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 HFE2Q6ZVN8 426 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 BHLHA9Q7RTU4 235 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 TMC8Q8IU68 726 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 MICALL1Q8N3F8 863 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 EMC1Q8N766 993 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 VN1R2Q8NFZ6 395 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 TPCN2Q8NHX9 752 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 JOSD2Q8TAC2 188 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.04□□□□□ -0.32
ZNF3-211ENST00000460331 KHSRPQ92945 711 aaKnown RBP eCLIP13.04□□□□□ -0.32
ZNF3-211ENST00000460331 PABPC5Q96DU9 382 aaKnown RBP13.04□□□□□ -0.32
ZNF3-211ENST00000460331 PIWIL1Q96J94 861 aaKnown RBP13.04□□□□□ -0.32
ZNF3-211ENST00000460331 CNPY3Q9BT09 278 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 NMUR1Q9HB89 426 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.04□□□□□ -0.32
ZNF3-211ENST00000460331 CLDND1Q9NY35 253 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
ZNF3-211ENST00000460331 A0A0U1RQJ8 604 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 ZNF840PA6NDX5 716 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 LINC01565O15544 149 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 GJB6O95452 261 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 GLP2RO95838 553 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 F9P00740 461 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 RHOP08100 348 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 DDX6P26196 483 aaKnown RBP eCLIP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 ATP5C1P36542 298 aaKnown RBP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 FLT3P36888 993 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 SULT1E1P49888 294 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 KPNA1P52294 538 aaPredicted RBP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 MESDQ14696 234 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 SLC25A52Q3SY17 297 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 ATAT1Q5SQI0 421 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 RARS2Q5T160 578 aaKnown RBP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 C11orf63Q6NUN7 778 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 TMC5Q6UXY8 1006 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 GRASPQ7Z6J2 395 aaPredicted RBP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 GPR149Q86SP6 731 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 DAAM2Q86T65 1068 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 HS6ST3Q8IZP7 471 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 DEFB123Q8N688 67 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 C12orf76Q8N812 135 aaPredicted RBP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 NIPA2Q8N8Q9 360 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 ATRIPQ8WXE1 791 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 EDEM1Q92611 657 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 ZNF707Q96C28 371 aaPredicted RBP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 SERPINB11Q96P15 392 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 CDX2Q99626 313 aaPredicted RBP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 LRRC3Q9BY71 257 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 NACA2Q9H009 215 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 IL21Q9HBE4 155 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 ZNF334Q9HCZ1 680 aaPredicted RBP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
ZNF3-211ENST00000460331 TRIM10Q9UDY6 481 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 COG5Q9UP83 839 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 NAALADL1Q9UQQ1 740 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 CLUHO75153 1309 aa13.03□□□□□ -0.32
ZNF3-211ENST00000460331 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.33
ZNF3-211ENST00000460331 TLR5O60602 858 aa13.02□□□□□ -0.33
ZNF3-211ENST00000460331 PROSCO94903 275 aa13.02□□□□□ -0.33
ZNF3-211ENST00000460331 MOCS3O95396 460 aa13.02□□□□□ -0.33
ZNF3-211ENST00000460331 TUBB4AP04350 444 aa13.02□□□□□ -0.33
ZNF3-211ENST00000460331 FOSL2P15408 326 aa13.02□□□□□ -0.33
ZNF3-211ENST00000460331 MAN1A1P33908 653 aa13.02□□□□□ -0.33
ZNF3-211ENST00000460331 RBM10P98175 930 aaKnown RBP13.02□□□□□ -0.33
ZNF3-211ENST00000460331 DEUP1Q05D60 604 aa13.02□□□□□ -0.33
ZNF3-211ENST00000460331 HADHQ16836 314 aaKnown RBP13.02□□□□□ -0.33
ZNF3-211ENST00000460331 CTC1Q2NKJ3 1217 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms