RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 GTPBP10A4D1E9 387 aaKnown RBP18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 CHURC1-FNTBB4DL54 471 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 EIF2DP41214 584 aaKnown RBP18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 GAD2Q05329 585 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 DHCR24Q15392 516 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 SMYD5Q6GMV2 418 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 LCLAT1Q6UWP7 414 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 GBP6Q6ZN66 633 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 NUDT18Q6ZVK8 323 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 RSRC2Q7L4I2 434 aaKnown RBP18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 RRAGAQ7L523 313 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 SIX6OS1Q8N1H7 587 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 ZFRQ96KR1 1074 aaKnown RBP18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 STRIP2Q9ULQ0 834 aa18.42■□□□□ 0.54
SCARNA2-201ENST00000458748 K7ESF4 209 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 O00370 1275 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 MED7O43513 233 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 ZBED1O96006 694 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 EGFP01133 1207 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 IRF1P10914 325 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 ADH5P11766 374 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 KRT5P13647 590 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 CNR2P34972 360 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 COG7P83436 770 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 PDE4CQ08493 712 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 CNGA2Q16280 664 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 DPCR1Q3MIW9 517 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 RAB41Q5JT25 222 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 TTC30AQ86WT1 665 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 RBBP8NLQ8NC74 664 aaPredicted RBP18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 KCTD13Q8WZ19 329 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 KLF16Q9BXK1 252 aaPredicted RBP18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 FBRSL1Q9HCM7 1045 aaKnown RBP18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 UBE2TQ9NPD8 197 aaPredicted RBP18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 OLA1Q9NTK5 396 aaKnown RBP18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 ZNF510Q9Y2H8 683 aa18.41■□□□□ 0.54
SCARNA2-201ENST00000458748 KIAA1549LQ6ZVL6 1849 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 MBD3O95983 291 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 CYP17A1P05093 508 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 YWHAGP61981 247 aaKnown RBP eCLIP18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 MAN2A1Q16706 1144 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 EXOC3L4Q17RC7 722 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 TRIM65Q6PJ69 517 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 HTR3DQ70Z44 454 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 LONP2Q86WA8 852 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 GOLGA1Q92805 767 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 SECISBP2LQ93073 1101 aaKnown RBP18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 ACDQ96AP0 544 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 RMDN1Q96DB5 314 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 DCLK3Q9C098 648 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 NMUR1Q9HB89 426 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 CNGB3Q9NQW8 809 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 SLC8A2Q9UPR5 921 aa18.4■□□□□ 0.54
SCARNA2-201ENST00000458748 ATG2BQ96BY7 2078 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 CCDC163A0A0D9SF12 145 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 M0QYV0 167 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 RNF40O75150 1001 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 TBX18O95935 607 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 TPM2P07951 284 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 OPRD1P41143 372 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 PM20D1Q6GTS8 502 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 SCD5Q86SK9 330 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 ARHGEF19Q8IW93 802 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 UBA3Q8TBC4 463 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 PNKPQ96T60 521 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 OSER1Q9NX31 292 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 NCDNQ9UBB6 729 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 APEX2Q9UBZ4 518 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 RAB23Q9ULC3 237 aa18.39■□□□□ 0.53
SCARNA2-201ENST00000458748 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.39■□□□□ 0.53not detected■□□□□ 9.7
SCARNA2-201ENST00000458748 APODP05090 189 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 PGFP49763 221 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 ZNF132P52740 706 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 FOXK2Q01167 660 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 ADIGQ0VDE8 80 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 GAB4Q2WGN9 574 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 ANO4Q32M45 955 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 LY6G5CQ5SRR4 150 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 RHBDF2Q6PJF5 856 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 SASS6Q6UVJ0 657 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 WDR5BQ86VZ2 330 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 MIB1Q86YT6 1006 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 BBS7Q8IWZ6 715 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 SCML4Q8N228 414 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 CAMKK1Q8N5S9 505 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 RNF139Q8WU17 664 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 KAT5Q92993 513 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 HSFY1Q96LI6 401 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 CRACR2AQ9BSW2 395 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 ULBP1Q9BZM6 244 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 SPHK2Q9NRA0 654 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 WDR35Q9P2L0 1181 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 RASAL2Q9UJF2 1139 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 SMG5Q9UPR3 1016 aaKnown RBP18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 CNTN6Q9UQ52 1028 aa18.38■□□□□ 0.53
SCARNA2-201ENST00000458748 MYOFQ9NZM1 2061 aa18.37■□□□□ 0.53
SCARNA2-201ENST00000458748 CEP250Q9BV73 2442 aa18.37■□□□□ 0.53
SCARNA2-201ENST00000458748 SCAMP3O14828 347 aaKnown RBP18.37■□□□□ 0.53
SCARNA2-201ENST00000458748 HOXC11O43248 304 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms