RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 STMN4Q9H169 189 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 C11orf49Q9H6J7 331 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 CLIC5Q9NZA1 410 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 SCML2Q9UQR0 700 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 VWA8A3KMH1 1905 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 GREB1Q4ZG55 1949 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 MYBPHLA2RUH7 354 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 GOLGA6BA6NDN3 693 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 APOL1O14791 398 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 GABBR2O75899 941 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 TIMP1P01033 207 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 KLRC2P26717 231 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 TNNT3P45378 269 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 CTCFP49711 727 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 HDAC4P56524 1084 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 RBM10P98175 930 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 CDK16Q00536 496 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 SLC7A5Q01650 507 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 KRT17Q04695 432 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 TLE2Q04725 743 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 ADIGQ0VDE8 80 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 GPR17Q13304 367 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 ORC1Q13415 861 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 DPYSL3Q14195 570 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 PPP2R5DQ14738 602 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 NOMO1Q15155 1222 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 EFHC2Q5JST6 749 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 TTC27Q6P3X3 843 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 CYP4V2Q6ZWL3 525 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 NECAB2Q7Z6G3 386 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 MON1AQ86VX9 555 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 TMEM199Q8N511 208 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 RNF169Q8NCN4 708 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 PPP1R13LQ8WUF5 828 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 RAPGEF5Q92565 580 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 P3H4Q92791 437 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 HAPLN3Q96S86 360 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 ROPN1BQ9BZX4 212 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 OSBPL2Q9H1P3 480 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 NRDE2Q9H7Z3 1164 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 ZWILCHQ9H900 591 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 ROPN1Q9HAT0 212 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 AAASQ9NRG9 546 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 SMARCAL1Q9NZC9 954 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 CHORDC1Q9UHD1 332 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 FZD10Q9ULW2 581 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 NFU1Q9UMS0 254 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 INPP5FQ9Y2H2 1132 aa7.12□□□□□ -1.27
ECHDC1-210ENST00000454859 SCN5AQ14524 2016 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 NRP1O14786 923 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 DAPK3O43293 454 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 CST8O60676 142 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 PQBP1O60828 265 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 TCEA3O75764 348 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 DGKIO75912 1065 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 DDHD2O94830 711 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 SEC31AO94979 1220 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 IGLV3-25P01717 112 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 ABHD2P08910 425 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 LAG3P18627 525 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 IL1R2P27930 398 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 ECHS1P30084 290 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 MAGEA6P43360 314 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 OR1G1P47890 313 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 TUFMP49411 452 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 CXCR3P49682 368 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 RGS7P49802 495 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 CDH6P55285 790 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 MAP3K7CLP57077 242 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 RNASE9P60153 205 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 RASA2Q15283 850 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 P3H1Q32P28 736 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 ANKRD20A8PQ5CZ79 823 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 KIAA0319Q5VV43 1072 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 RHBDF2Q6PJF5 856 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 TMC3Q7Z5M5 1100 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 RNF168Q8IYW5 571 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 ZDHHC14Q8IZN3 488 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 LZTR1Q8N653 840 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 PDZD8Q8NEN9 1154 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 IFT81Q8WYA0 676 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 PIK3R5Q8WYR1 880 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 FATE1Q969F0 183 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 RNF25Q96BH1 459 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 PABPC3Q9H361 631 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 PCDH18Q9HCL0 1135 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 NGRNQ9NPE2 291 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 GRHL1Q9NZI5 618 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 FETUBQ9UGM5 382 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 FBXW11Q9UKB1 542 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 ZNF148Q9UQR1 794 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 MYO16Q9Y6X6 1858 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 GOLGA6L10A6NI86 522 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 AP3B1O00203 1094 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 TNFRSF10BO14763 440 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 CAPN9O14815 690 aa7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 STK10O94804 968 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-210ENST00000454859 KRT14P02533 472 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms