RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SYCE2Q6PIF2 218 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 HFE2Q6ZVN8 426 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 SLFN11Q7Z7L1 901 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 GPR149Q86SP6 731 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 JOSD2Q8TAC2 188 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 ATRIPQ8WXE1 791 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 CENPIQ92674 756 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-206ENST00000454852 GOLGA1Q92805 767 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 NPY6RQ99463 290 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 NCAPGQ9BPX3 1015 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 ZNF334Q9HCZ1 680 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-206ENST00000454852 OSGEPQ9NPF4 335 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 ASAH2Q9NR71 780 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 METTL5Q9NRN9 209 aaKnown RBP11.78□□□□□ -0.52
TRAF4-206ENST00000454852 OLA1Q9NTK5 396 aaKnown RBP11.78□□□□□ -0.52
TRAF4-206ENST00000454852 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAF4-206ENST00000454852 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAF4-206ENST00000454852 TRPM5Q9NZQ8 1165 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 GMIPQ9P107 970 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 CLEC1BQ9P126 229 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 DNMT3BQ9UBC3 853 aaKnown RBP11.78□□□□□ -0.52
TRAF4-206ENST00000454852 MYO1AQ9UBC5 1043 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 TFR2Q9UP52 801 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 DUSP10Q9Y6W6 482 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 CLUHO75153 1309 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 MYO9BQ13459 2157 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 DENND4CQ5VZ89 1909 aa11.78□□□□□ -0.52
TRAF4-206ENST00000454852 PRRC2BQ5JSZ5 2229 aaKnown RBP11.78□□□□□ -0.52
TRAF4-206ENST00000454852 CCDC195A0A1B0GUA6 201 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 A0A1W2PQH9 124 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 MYO1FO00160 1098 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 CCL16O15467 120 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 LINC01565O15544 149 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 ABL1P00519 1130 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 OAS1P00973 400 aaKnown RBP11.77□□□□□ -0.53
TRAF4-206ENST00000454852 RALAP11233 206 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 GPD1P21695 349 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 DDX6P26196 483 aaKnown RBP eCLIP11.77□□□□□ -0.535e-6■□□□□ 11.1
TRAF4-206ENST00000454852 WEE1P30291 646 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 LTBRP36941 435 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 PGFP49763 221 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 RBM10P98175 930 aaKnown RBP11.77□□□□□ -0.53
TRAF4-206ENST00000454852 OGDHQ02218 1023 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 ZNF252P-AS1Q0IIN9 211 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 NNTQ13423 1086 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 PIGHQ14442 188 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-206ENST00000454852 SLC25A52Q3SY17 297 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 GAREM2Q75VX8 874 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 STRADAQ7RTN6 431 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 TADA2BQ86TJ2 420 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 ZSCAN30Q86W11 494 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 DEFB106AQ8N104 65 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 STKLD1Q8NE28 680 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 TPCN2Q8NHX9 752 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 NDRG1Q92597 394 aaKnown RBP11.77□□□□□ -0.53
TRAF4-206ENST00000454852 FAM149B1Q96BN6 582 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 MSLNLQ96KJ4 702 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 GUCD1Q96NT3 240 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 MCEEQ96PE7 176 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 CDX2Q99626 313 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-206ENST00000454852 CNPY3Q9BT09 278 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 S1PR5Q9H228 398 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 ADAM7Q9H2U9 754 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 SMOC2Q9H3U7 446 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 IGFLR1Q9H665 355 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 OSER1Q9NX31 292 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 ANAPC7Q9UJX3 599 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 STAP1Q9ULZ2 295 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 MAGED2Q9UNF1 606 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-206ENST00000454852 NOTCH4Q99466 2003 aa11.77□□□□□ -0.53
TRAF4-206ENST00000454852 ANAPC1Q9H1A4 1944 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 USP27XA6NNY8 438 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 ZNF197O14709 1029 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 TBX10O75333 385 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 MOSPD3O75425 235 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 PROSCO94903 275 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 RHOP08100 348 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 RARGP13631 454 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 PDGFRAP16234 1089 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 GABRR2P28476 465 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 SDC4P31431 198 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 SLC1A1P43005 524 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 IFRD2Q12894 506 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-206ENST00000454852 CCDC14Q49A88 953 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 OTUD1Q5VV17 481 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-206ENST00000454852 BTBD8Q5XKL5 378 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 EMC1Q8N766 993 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 LRRC57Q8N9N7 239 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 RXFP2Q8WXD0 754 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 SMG7Q92540 1137 aaKnown RBP11.76□□□□□ -0.53
TRAF4-206ENST00000454852 CORO1BQ9BR76 489 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 MTMR10Q9NXD2 777 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 TRIM10Q9UDY6 481 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 CHORDC1Q9UHD1 332 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-206ENST00000454852 NAALADL1Q9UQQ1 740 aa11.76□□□□□ -0.53
TRAF4-206ENST00000454852 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
TRAF4-206ENST00000454852 CAPN9O14815 690 aa11.75□□□□□ -0.53
TRAF4-206ENST00000454852 BUB1BO60566 1050 aaPredicted RBP11.75□□□□□ -0.53
TRAF4-206ENST00000454852 TLR5O60602 858 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms