RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 OLA1Q9NTK5 396 aaKnown RBP9.32□□□□□ -0.92
COL8A1-203ENST00000452013 DUS2Q9NX74 493 aaKnown RBP9.32□□□□□ -0.92
COL8A1-203ENST00000452013 SMPD4Q9NXE4 827 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 CFAP97Q9P2B7 532 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 AJAP1Q9UKB5 411 aaPredicted RBP9.32□□□□□ -0.92
COL8A1-203ENST00000452013 STRIP2Q9ULQ0 834 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 SH3BP1Q9Y3L3 701 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 REV3LO60673 3130 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 KANSL1LA0AUZ9 987 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 KRBA1A5PL33 1030 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 GOLGA6L6A8MZA4 724 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 F8VZ95 297 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 GFPT2O94808 682 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 TBX18O95935 607 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 PNMA6AP0CW24 399 aaPredicted RBP9.31□□□□□ -0.92
COL8A1-203ENST00000452013 JAM2P57087 298 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 DAOAP59103 153 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 USP4Q13107 963 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 ASTLQ6HA08 431 aaPredicted RBP9.31□□□□□ -0.92
COL8A1-203ENST00000452013 HFE2Q6ZVN8 426 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 RALGPS2Q86X27 583 aaPredicted RBP9.31□□□□□ -0.92
COL8A1-203ENST00000452013 SCUBE3Q8IX30 993 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 CPA6Q8N4T0 437 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 WDTC1Q8N5D0 677 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 MSANTD4Q8NCY6 345 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 ATP2A3Q93084 1043 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 OTUB2Q96DC9 234 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 ZFYVE19Q96K21 471 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 PPP1R13BQ96KQ4 1090 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 KLF16Q9BXK1 252 aaPredicted RBP9.31□□□□□ -0.92
COL8A1-203ENST00000452013 OSBPL6Q9BZF3 934 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 DCLK3Q9C098 648 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 SYNCQ9H7C4 482 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 C11orf16Q9NQ32 467 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 HEBP1Q9NRV9 189 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 OSER1Q9NX31 292 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 LSM7Q9UK45 103 aaKnown RBP9.31□□□□□ -0.92
COL8A1-203ENST00000452013 MYO6Q9UM54 1294 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 ZNF510Q9Y2H8 683 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 SIT1Q9Y3P8 196 aa9.31□□□□□ -0.92
COL8A1-203ENST00000452013 PRUNE2Q8WUY3 3088 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 FAM170BA6NMN3 283 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 YJEFN3A6XGL0 299 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 E7ENQ6 273 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 ARNTLO00327 626 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 PIK3R2O00459 728 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 CAPN9O14815 690 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 EPHB6O15197 1021 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 CBFA2T2O43439 604 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 GABBR2O75899 941 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 NFATC1O95644 943 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 LTFP02788 710 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 GLI1P08151 1106 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 FERP16591 822 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 AVPR2P30518 371 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 PGFP49763 221 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 NUBP1P53384 320 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 ZXDBP98169 803 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 EFEMP1Q12805 493 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 PDCLQ13371 301 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 EFHC1Q5JVL4 640 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 TAF3Q5VWG9 929 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 TPRG1Q6ZUI0 275 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 HTR3DQ70Z44 454 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 BEND5Q7L4P6 421 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 MTERF4Q7Z6M4 381 aaKnown RBP9.3□□□□□ -0.92
COL8A1-203ENST00000452013 ERICH1Q86X53 443 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 ZDHHC17Q8IUH5 632 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 ADGRG2Q8IZP9 1017 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 ZNF397Q8NF99 534 aaPredicted RBP9.3□□□□□ -0.92
COL8A1-203ENST00000452013 IPO4Q8TEX9 1081 aaKnown RBP9.3□□□□□ -0.92
COL8A1-203ENST00000452013 FAM3CQ92520 227 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 NDRG1Q92597 394 aaKnown RBP9.3□□□□□ -0.92
COL8A1-203ENST00000452013 IQCDQ96DY2 449 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 DDX23Q9BUQ8 820 aaKnown RBP9.3□□□□□ -0.92
COL8A1-203ENST00000452013 LINC00597Q9H2U6 94 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 EBF3Q9H4W6 596 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 ECT2Q9H8V3 914 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 TBC1D17Q9HA65 648 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 GTSE1Q9NYZ3 720 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 MARCH2Q9P0N8 246 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 RASAL2Q9UJF2 1139 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 NUDT5Q9UKK9 219 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 WNT6Q9Y6F9 365 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 PIAS3Q9Y6X2 628 aa9.3□□□□□ -0.92
COL8A1-203ENST00000452013 TSC2P49815 1807 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 SLC12A8A0AV02 714 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 E5RJQ4 531 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 SPECC1L-ADORA2AF8WAN1 911 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 RRP9O43818 475 aaKnown RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 LSM8O95777 96 aaKnown RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 PDGFBP01127 241 aaPredicted RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 IRF1P10914 325 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 NCAM1P13591 858 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 AOC1P19801 751 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 CDH5P33151 784 aaPredicted RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 HARS2P49590 506 aaKnown RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 YWHAZP63104 245 aaKnown RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 CDR2Q01850 454 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 ARID5AQ03989 594 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms