RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MORF4L1Q9UBU8 362 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 GNEQ9Y223 722 aaKnown RBP15.41■□□□□ 0.06
SF1-211ENST00000448404 KPNA7A9QM74 516 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 YY1P25490 414 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 ARL4CP56559 192 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 POU5F1BQ06416 359 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 ADIGQ0VDE8 80 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 BMPR2Q13873 1038 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 UBXN11Q5T124 520 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 CTAGE3PQ8IX95 158 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 HASPINQ8TF76 798 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 LGMNQ99538 433 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 RSAD1Q9HA92 442 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 TMEM30AQ9NV96 361 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 TCRBV9S1A1TA0A576 114 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 C2orf71A6NGG8 1288 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 A8MUI8 341 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 F2P00734 622 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 CYP2F1P24903 491 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 HUNKP57058 714 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 NME3Q13232 169 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 WSCD1Q658N2 575 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 LVRNQ6Q4G3 990 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 SPATA21Q7Z572 469 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 BEST2Q8NFU1 509 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 USP15Q9Y4E8 981 aaPredicted RBP15.4■□□□□ 0.06
SF1-211ENST00000448404 IPPQ9Y573 584 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 A6NJR5 290 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 SRRM3A6NNA2 597 aaPredicted RBP15.4■□□□□ 0.06
SF1-211ENST00000448404 PGK1P00558 417 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 NUMBP49757 651 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 CACNA2D1P54289 1103 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 SYPL2Q5VXT5 272 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 TRMT10BQ6PF06 316 aaKnown RBP15.4■□□□□ 0.06
SF1-211ENST00000448404 YTHDF3Q7Z739 585 aaKnown RBP15.4■□□□□ 0.06
SF1-211ENST00000448404 PDIK1LQ8N165 341 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 ANKS4BQ8N8V4 417 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 SMG8Q8ND04 991 aaKnown RBP15.4■□□□□ 0.06
SF1-211ENST00000448404 PTPRN2Q92932 1015 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 SERAC1Q96JX3 654 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 SMC6Q96SB8 1091 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 KCNK16Q96T55 309 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 SLC4A5Q9BY07 1137 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 PITPNM3Q9BZ71 974 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 PLAC1Q9HBJ0 212 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 ETNK1Q9HBU6 452 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 NUMBLQ9Y6R0 609 aa15.4■□□□□ 0.06
SF1-211ENST00000448404 E2F8A0AVK6 867 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 TCEA3O75764 348 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 ASMTLO95671 621 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 ZBED1O96006 694 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 ZNF865P0CJ78 1059 aaPredicted RBP15.39■□□□□ 0.05
SF1-211ENST00000448404 FAAP100Q0VG06 881 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 FAM110CQ1W6H9 321 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 DCAF6Q58WW2 860 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 CXCL17Q6UXB2 119 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 ANKRD23Q86SG2 305 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 PIGZQ86VD9 579 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 ZNF410Q86VK4 478 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 ECHDC2Q86YB7 292 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 RELL1Q8IUW5 271 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 KCTD15Q96SI1 283 aaPredicted RBP15.39■□□□□ 0.05
SF1-211ENST00000448404 ZIC5Q96T25 663 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 MTMR10Q9NXD2 777 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 SNX10Q9Y5X0 201 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 ENDOD1O94919 500 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 C6orf222P0C671 652 aaPredicted RBP15.39■□□□□ 0.05
SF1-211ENST00000448404 CTGFP29279 349 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 PCK1P35558 622 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 TMEM110Q86TL2 294 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 PNMA8AQ86V59 439 aaPredicted RBP15.39■□□□□ 0.05
SF1-211ENST00000448404 DEFB106AQ8N104 65 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 TCP10LQ8TDR4 215 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 PARK7Q99497 189 aaKnown RBP15.39■□□□□ 0.05
SF1-211ENST00000448404 CCDC134Q9H6E4 229 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 SMYD2Q9NRG4 433 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 MAD1L1Q9Y6D9 718 aa15.39■□□□□ 0.05
SF1-211ENST00000448404 IQCA1LA6NCM1 817 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 F8W810 466 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 APOL1O14791 398 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 CREB3O43889 395 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 KIF1CO43896 1103 aaKnown RBP15.38■□□□□ 0.05
SF1-211ENST00000448404 RDXP35241 583 aaKnown RBP15.38■□□□□ 0.05
SF1-211ENST00000448404 MLH1P40692 756 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 PSEN2P49810 448 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 GEMIN4P57678 1058 aaKnown RBP15.38■□□□□ 0.05
SF1-211ENST00000448404 IQSEC1Q6DN90 963 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 ALKAL1Q6UXT8 129 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 CROCCP2Q86T23 111 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 PPM1NQ8N819 430 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 STKLD1Q8NE28 680 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 CCHCR1Q8TD31 782 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 DENND1AQ8TEH3 1009 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 DEPDC1BQ8WUY9 529 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 ARHGAP39Q9C0H5 1083 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 SEPT10Q9P0V9 454 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 PSMC3IPQ9P2W1 217 aaPredicted RBP15.38■□□□□ 0.05
SF1-211ENST00000448404 DCTN4Q9UJW0 460 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 PTGESO14684 152 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 OAS1P00973 400 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms