RNA–Protein interactions for RNA: ENST00000448327.1

LINC01564-201, Transcript of long intergenic non-protein coding RNA 1564, humanhuman

TSL 3 BASIC

Gene LINC01564, Length 566 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01564-201ENST00000448327 EIF5BO60841 1220 aaKnown RBP3.2□□□□□ -1.9
LINC01564-201ENST00000448327 LDB3O75112 727 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 USP12O75317 370 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 SLC11A2P49281 568 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 MAP2K6P52564 334 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 WNT3P56703 355 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 EGR4Q05215 589 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 PLS1Q14651 629 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 SLC44A5Q8NCS7 719 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 SLC35A4Q96G79 324 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 FAM126AQ9BYI3 521 aaPredicted RBP3.2□□□□□ -1.9
LINC01564-201ENST00000448327 TMX1Q9H3N1 280 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 WNT16Q9UBV4 365 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 PHLDB1Q86UU1 1377 aa3.2□□□□□ -1.9
LINC01564-201ENST00000448327 FYB1O15117 783 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 SPRY2O43597 315 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 TLX3O43711 291 aaPredicted RBP3.19□□□□□ -1.9
LINC01564-201ENST00000448327 TCEA1P23193 301 aaKnown RBP3.19□□□□□ -1.9
LINC01564-201ENST00000448327 COMPP49747 757 aaPredicted RBP3.19□□□□□ -1.9
LINC01564-201ENST00000448327 SLC12A2P55011 1212 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 PCBP2Q15366 365 aaKnown RBP eCLIP3.19□□□□□ -1.9
LINC01564-201ENST00000448327 PTCHD3Q3KNS1 767 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 PLA1AQ53H76 456 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 SLC15A4Q8N697 577 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 LMO3Q8TAP4 145 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 ELP5Q8TE02 316 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 CTHRC1Q96CG8 243 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 TM2D2Q9BX73 214 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 NUAK2Q9H093 628 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 C6orf106Q9H6K1 298 aaPredicted RBP3.19□□□□□ -1.9
LINC01564-201ENST00000448327 RMI1Q9H9A7 625 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 USP29Q9HBJ7 922 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 FZD3Q9NPG1 666 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 CNNM1Q9NRU3 951 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 PCDHGB1Q9Y5G3 927 aa3.19□□□□□ -1.9
LINC01564-201ENST00000448327 SHROOM4Q9ULL8 1493 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 A0A1W2PPC1 479 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 SHTN1A0MZ66 631 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 H0YGN5 161 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 AKAP10O43572 662 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 PDCP20941 246 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 CDK11BP21127 795 aaKnown RBP3.18□□□□□ -1.9
LINC01564-201ENST00000448327 EPHA3P29320 983 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 BCAT1P54687 386 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 DSCR9P59020 149 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 DDR1Q08345 913 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 ODF3L2Q3SX64 289 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 NUGGCQ68CJ6 796 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 RBM23Q86U06 439 aaKnown RBP3.18□□□□□ -1.9
LINC01564-201ENST00000448327 MORC1Q86VD1 984 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 GAS2L3Q86XJ1 694 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 DDX42Q86XP3 938 aaKnown RBP eCLIP3.18□□□□□ -1.9
LINC01564-201ENST00000448327 DNAJC5GQ8N7S2 189 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 C12orf76Q8N812 135 aaPredicted RBP3.18□□□□□ -1.9
LINC01564-201ENST00000448327 RAPGEF4Q8WZA2 1011 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 PIGKQ92643 395 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 MTFMTQ96DP5 389 aaKnown RBP3.18□□□□□ -1.9
LINC01564-201ENST00000448327 FCRL5Q96RD9 977 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 VN1R3Q9BXE9 311 aa3.18□□□□□ -1.9
LINC01564-201ENST00000448327 SLC22A23A1A5C7 686 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 THP07101 528 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 CXCR3P49682 368 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 KRT85P78386 507 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 WASHC2DQ5SRD0 308 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 SYDE2Q5VT97 1194 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 ADGRF4Q8IZF3 695 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 CELF5Q8N6W0 485 aaKnown RBP3.17□□□□□ -1.9
LINC01564-201ENST00000448327 DNAJB14Q8TBM8 379 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 BCAS4Q8TDM0 211 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 LPAR1Q92633 364 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 WBP2Q969T9 261 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 EDC3Q96F86 508 aaKnown RBP3.17□□□□□ -1.9
LINC01564-201ENST00000448327 TM6SF1Q9BZW5 370 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 SPC25Q9HBM1 224 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 PAPOLBQ9NRJ5 636 aaKnown RBP3.17□□□□□ -1.9
LINC01564-201ENST00000448327 HIF1ANQ9NWT6 349 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 CPA4Q9UI42 421 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 MYO6Q9UM54 1294 aa3.17□□□□□ -1.9
LINC01564-201ENST00000448327 TRIP12Q14669 1992 aaPredicted RBP3.17□□□□□ -1.9
LINC01564-201ENST00000448327 RRHO14718 337 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 UGDHO60701 494 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 SRGAP2O75044 1071 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 HMGB1P09429 215 aaKnown RBP3.16□□□□□ -1.9
LINC01564-201ENST00000448327 PKMP14618 531 aaKnown RBP3.16□□□□□ -1.9
LINC01564-201ENST00000448327 NKX6-1P78426 367 aaPredicted RBP3.16□□□□□ -1.9
LINC01564-201ENST00000448327 MTA1Q13330 715 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 SLC4A8Q2Y0W8 1093 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 PRAMEF19Q5SWL8 479 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 LMBRD2Q68DH5 695 aaPredicted RBP3.16□□□□□ -1.9
LINC01564-201ENST00000448327 TRILQ7L0X0 811 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 NECAB2Q7Z6G3 386 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 MPP5Q8N3R9 675 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 SEZ6LQ9BYH1 1024 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 MS4A7Q9GZW8 240 aaPredicted RBP3.16□□□□□ -1.9
LINC01564-201ENST00000448327 TRHDEQ9UKU6 1024 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 ATP8A1Q9Y2Q0 1164 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 MED16Q9Y2X0 877 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 INSL5Q9Y5Q6 135 aa3.16□□□□□ -1.9
LINC01564-201ENST00000448327 SBNO2Q9Y2G9 1366 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms