RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 FAM153CQ494X1 144 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 CTXN3Q4LDR2 81 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 PPP6R3Q5H9R7 873 aaPredicted RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 KCNT1Q5JUK3 1230 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 AGBL2Q5U5Z8 902 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 DAB2IPQ5VWQ8 1189 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 BTBD8Q5XKL5 378 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 FAM171BQ6P995 826 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 TRAF7Q6Q0C0 670 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 CTU1Q7Z7A3 348 aaKnown RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 ANKLE1Q8NAG6 615 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 SLC35B2Q8TB61 432 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 FBXO25Q8TCJ0 367 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 CENPIQ92674 756 aaPredicted RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 ACSF2Q96CM8 615 aaPredicted RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 ZIM3Q96PE6 472 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 PABPC3Q9H361 631 aaKnown RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 GRHL1Q9NZI5 618 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 PAK5Q9P286 719 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 FAM153AQ9UHL3 310 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 DNPEPQ9ULA0 475 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 RAD54BQ9Y620 910 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 SCN1AP35498 2009 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 HACD1B0YJ81 288 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 M0QYT0 321 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 EIF3HO15372 352 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS50-205ENST00000441602 GRIK1P39086 918 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ITGA8P53708 1063 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 GPS1Q13098 491 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 XRCC4Q13426 336 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 IKBKEQ14164 716 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 DPYSL3Q14195 570 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 NOMO1Q15155 1222 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 TRIP13Q15645 432 aaPredicted RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 PKN2Q16513 984 aaKnown RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 DPYSL2Q16555 572 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 PAN2Q504Q3 1202 aaKnown RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 CNKSR3Q6P9H4 555 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 CENPUQ71F23 418 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 SCN4BQ8IWT1 228 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 COLGALT2Q8IYK4 626 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 TSEN2Q8NCE0 465 aaKnown RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 SLC7A14Q8TBB6 771 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 C2orf15Q8WU43 125 aaKnown RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 EXOC4Q96A65 974 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 NTAN1Q96AB6 310 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 EPAS1Q99814 870 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 SMOQ99835 787 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 CENPHQ9H3R5 247 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 FBXO44Q9H4M3 255 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 PPCSQ9HAB8 311 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ZDHHC18Q9NUE0 388 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 COMMD8Q9NX08 183 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 NME7Q9Y5B8 376 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 TBKBP1A7MCY6 615 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 I3L4J1 428 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 HCRTO43612 131 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ENDOD1O94919 500 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 RTN3O95197 1032 aaPredicted RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 TCF4P15884 667 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 BDNFP23560 247 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 CYP2F1P24903 491 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 MAGEA11P43364 429 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ARL4CP56559 192 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 RPL10AP62906 217 aaKnown RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 COG7P83436 770 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 MTA1Q13330 715 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ANKRD20A8PQ5CZ79 823 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 CLLU1OSQ5K130 101 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 C6orf118Q5T5N4 469 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ZDHHC24Q6UX98 284 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 SLC39A5Q6ZMH5 540 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ANKRD33Q7Z3H0 272 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 PPIL6Q8IXY8 311 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 IQCKQ8N0W5 287 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 C3orf58Q8NDZ4 430 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 HASPINQ8TF76 798 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 NPY6RQ99463 290 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 LPIN3Q9BQK8 851 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ROPN1BQ9BZX4 212 aaPredicted RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 PHACTR1Q9C0D0 580 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ROPN1Q9HAT0 212 aaPredicted RBP6.27□□□□□ -1.41
VPS50-205ENST00000441602 CSNK1G1Q9HCP0 422 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 DONSONQ9NYP3 566 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 ADAM28Q9UKQ2 775 aa6.27□□□□□ -1.41
VPS50-205ENST00000441602 PPP1R12AO14974 1030 aaPredicted RBP6.26□□□□□ -1.41
VPS50-205ENST00000441602 OAZ2O95190 189 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 MYCP01106 439 aaPredicted RBP6.26□□□□□ -1.41
VPS50-205ENST00000441602 NCAM1P13591 858 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 CPB1P15086 417 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 HTR7P34969 479 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 PHBP35232 272 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 SERPINB6P35237 376 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 ATN1P54259 1190 aaPredicted RBP6.26□□□□□ -1.41
VPS50-205ENST00000441602 HDAC4P56524 1084 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 SARNPP82979 210 aaKnown RBP6.26□□□□□ -1.41
VPS50-205ENST00000441602 ADCY1Q08828 1119 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 MBTPS1Q14703 1052 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 PDK1Q15118 436 aa6.26□□□□□ -1.41
VPS50-205ENST00000441602 P3H1Q32P28 736 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms