RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CFAP69A5D8W1 941 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 M0QZQ0 153 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 POMCP01189 267 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 CKBP12277 381 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 L1CAMP32004 1257 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 HPDP32754 393 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-202ENST00000439724 NOS2P35228 1153 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 MAGEA4P43358 317 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 SULT1E1P49888 294 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 YWHAZP63104 245 aaKnown RBP12.27□□□□□ -0.45
SMAD3-202ENST00000439724 AUHQ13825 339 aaKnown RBP12.27□□□□□ -0.45
SMAD3-202ENST00000439724 ZSCAN26Q16670 478 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 KYNUQ16719 465 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 CD300LGQ6UXG3 332 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 NPNTQ6UXI9 565 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 METTL23Q86XA0 190 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 UNC45BQ8IWX7 931 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 PPIL6Q8IXY8 311 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 SIX6OS1Q8N1H7 587 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 RNF169Q8NCN4 708 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 UHMK1Q8TAS1 419 aaKnown RBP12.27□□□□□ -0.45
SMAD3-202ENST00000439724 RTP4Q96DX8 246 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 PCED1BQ96HM7 432 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 NPY6RQ99463 290 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 SMOQ99835 787 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 RTP3Q9BQQ7 232 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 PAAF1Q9BRP4 392 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 CNOT10Q9H9A5 744 aaKnown RBP12.27□□□□□ -0.45
SMAD3-202ENST00000439724 PRDM16Q9HAZ2 1276 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 RGS18Q9NS28 235 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 DNAJC17Q9NVM6 304 aaKnown RBP12.27□□□□□ -0.45
SMAD3-202ENST00000439724 STAP1Q9ULZ2 295 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 AP4E1Q9UPM8 1137 aa12.27□□□□□ -0.45
SMAD3-202ENST00000439724 COL4A4P53420 1690 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-202ENST00000439724 A0A1W2PQ45 241 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-202ENST00000439724 A0A1W2PQY0 241 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 TLDC2A0PJX2 215 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 ARHGEF37A1IGU5 675 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 MYBPHLA2RUH7 354 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 DCDC2CA8MYV0 355 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 AP1G2O75843 785 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 INHAP05111 366 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 IVLP07476 585 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 ZFXP17010 805 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-202ENST00000439724 CYP2F1P24903 491 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 CTCFP49711 727 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-202ENST00000439724 TKTL1P51854 596 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 CDR1P51861 262 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 BCAR1P56945 870 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 MAP3K7CLP57077 242 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 GUCY1A3Q02108 690 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 STAT4Q14765 748 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 RAB41Q5JT25 222 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 OTUD1Q5VV17 481 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-202ENST00000439724 LHX8Q68G74 356 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 FAM171BQ6P995 826 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 DARS2Q6PI48 645 aaKnown RBP12.26□□□□□ -0.45
SMAD3-202ENST00000439724 NAT8LQ8N9F0 302 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 FAM71DQ8N9W8 422 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 SLAIN1Q8ND83 568 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 ZMIZ2Q8NF64 920 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 CPT1BQ92523 772 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 FAM149B1Q96BN6 582 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 SMARCD1Q96GM5 515 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 ACBD6Q9BR61 282 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 DHX35Q9H5Z1 703 aaKnown RBP12.26□□□□□ -0.45
SMAD3-202ENST00000439724 NRDE2Q9H7Z3 1164 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 C10orf88Q9H8K7 445 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 CSNK1G1Q9HCP0 422 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 SAYSD1Q9NPB0 183 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 CNGB3Q9NQW8 809 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
SMAD3-202ENST00000439724 RCOR3Q9P2K3 495 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-202ENST00000439724 TIMM13Q9Y5L4 95 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-202ENST00000439724 PTPRDP23468 1912 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 PATJQ8NI35 1801 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 BCLAF3A2AJT9 711 aaKnown RBP12.25□□□□□ -0.45
SMAD3-202ENST00000439724 C9IYK1 514 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 HHLA1C9JL84 531 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 H7C0C1 242 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 ALOX15BO15296 676 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 B3GAT3O94766 335 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 EOMESO95936 686 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 TYMPP19971 482 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 LSP1P33241 339 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 MAP2K2P36507 400 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 ATP5OP48047 213 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 ATXN1P54253 815 aaKnown RBP12.25□□□□□ -0.45
SMAD3-202ENST00000439724 PRMT2P55345 433 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 DAOAP59103 153 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 XRCC4Q13426 336 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 INTS6LQ5JSJ4 861 aaKnown RBP12.25□□□□□ -0.45
SMAD3-202ENST00000439724 C1orf228Q6PIY5 440 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 DCLRE1AQ6PJP8 1040 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 CENPUQ71F23 418 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 CCDC185Q8N715 623 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 RSPH1Q8WYR4 309 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 SUSD3Q96L08 255 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 C9orf72Q96LT7 481 aa12.25□□□□□ -0.45
SMAD3-202ENST00000439724 KCTD15Q96SI1 283 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms