RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 DCTN4Q9UJW0 460 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 ADGRB2O60241 1585 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 NEURL4Q96JN8 1562 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 TARSL2A2RTX5 802 aaKnown RBP12.5□□□□□ -0.41
NEK1-201ENST00000439128 MYL2P10916 166 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 PTPN3P26045 913 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 CDC16Q13042 620 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 GSPT2Q8IYD1 628 aaKnown RBP12.5□□□□□ -0.41
NEK1-201ENST00000439128 KCTD10Q9H3F6 313 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 PCMTD2Q9NV79 361 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 VANGL2Q9ULK5 521 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 GIT1Q9Y2X7 761 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 IL1BP01584 269 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 PTPN1P18031 435 aaKnown RBP12.5□□□□□ -0.41
NEK1-201ENST00000439128 ITGB6P18564 788 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 TGM2P21980 687 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 FSTL1Q12841 308 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 RARS2Q5T160 578 aaKnown RBP12.5□□□□□ -0.41
NEK1-201ENST00000439128 SDHAF4Q5VUM1 108 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 EMBQ6PCB8 327 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 DLK2Q6UY11 383 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 ILDR2Q71H61 639 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 NAT16Q8N8M0 369 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 MAB21L3Q8N8X9 362 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 TCF25Q9BQ70 676 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 TTPALQ9BTX7 342 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 RBM22Q9NW64 420 aaKnown RBP eCLIP12.5□□□□□ -0.41
NEK1-201ENST00000439128 BTBD7Q9P203 1132 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 RNF112Q9ULX5 631 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 USP18Q9UMW8 372 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 EML1O00423 815 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 MAPTP10636 758 aaKnown RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 YWHAZP63104 245 aaKnown RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 TGM3Q08188 693 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 GPR158Q5T848 1215 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 PSRC1Q6PGN9 363 aaPredicted RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 C4orf22Q6V702 233 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 MARK2Q7KZI7 788 aaKnown RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 BRSK2Q8IWQ3 736 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 TATDN2Q93075 761 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 ZFP42Q96MM3 310 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 RBM15Q96T37 977 aaKnown RBP eCLIP12.49□□□□□ -0.41
NEK1-201ENST00000439128 MYOCQ99972 504 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 BBS2Q9BXC9 721 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 EPC1Q9H2F5 836 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 ABCC13Q9NSE7 274 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 FAM105AQ9NUU6 356 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 UBP1Q9NZI7 540 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 POLR1AO95602 1720 aaPredicted RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 TBL1XO60907 577 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 ADH1CP00326 375 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 SERPINF2P08697 491 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 CHP1Q99653 195 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 THAP2Q9H0W7 228 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 RNPEPQ9H4A4 650 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 TMEM161AQ9NX61 479 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 RRN3Q9NYV6 651 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 ANGPT2O15123 496 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 CDC25CP30307 473 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 RSPH1Q8WYR4 309 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 PRPF18Q99633 342 aaKnown RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 CNPY3Q9BT09 278 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 TXLNGQ9NUQ3 528 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 NMRK1Q9NWW6 199 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 GTF3C4Q9UKN8 822 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 GPSM3Q9Y4H4 160 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 ADGRG1Q9Y653 693 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 KIF20BQ96Q89 1820 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 SSU72P8A0A1W2PR75 194 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 TRDMT1O14717 391 aaKnown RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 GPC1P35052 558 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 CHKAP35790 457 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 POLR2LP62875 67 aaKnown RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 ZNF200P98182 395 aaPredicted RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 ZC3H12BQ5HYM0 836 aaKnown RBP12.49□□□□□ -0.41
NEK1-201ENST00000439128 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 GPR152Q8TDT2 470 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 MS4A14Q96JA4 679 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 MAML3Q96JK9 1138 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 SERAC1Q96JX3 654 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 WDR41Q9HAD4 459 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 ABCB6Q9NP58 842 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 CLDND1Q9NY35 253 aa12.49□□□□□ -0.41
NEK1-201ENST00000439128 SPATA31C2B4DYI2 1134 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 MAFO75444 373 aaPredicted RBP12.48□□□□□ -0.41
NEK1-201ENST00000439128 DNTTP04053 509 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 CLTBP09497 229 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 RARGP13631 454 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 UBXN2BQ14CS0 331 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 TMEM159Q96B96 161 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 ARL8AQ96BM9 186 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 ULBP1Q9BZM6 244 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 ALG6Q9Y672 507 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.48□□□□□ -0.41
NEK1-201ENST00000439128 KIAA1210Q9ULL0 1709 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 LRRIQ3A6PVS8 624 aaPredicted RBP12.48□□□□□ -0.41
NEK1-201ENST00000439128 APODP05090 189 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 SERPINB9P50453 376 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 RTP1P59025 263 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms