RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 TRIML1Q8N9V2 468 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 TTC16Q8NEE8 873 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 GPT2Q8TD30 523 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 CSGALNACT1Q8TDX6 532 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 FAM3CQ92520 227 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 EZH1Q92800 747 aaPredicted RBP9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 ATOH1Q92858 354 aaPredicted RBP9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 FBXO32Q969P5 355 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 JAKMIP2Q96AA8 810 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 CYFIP2Q96F07 1278 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 ZSWIM1Q9BR11 485 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 RBCK1Q9BYM8 510 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 LINC00597Q9H2U6 94 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 CHRDQ9H2X0 955 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 CCSER2Q9H7U1 834 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 KIF9Q9HAQ2 790 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 NMUR1Q9HB89 426 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 METTL14Q9HCE5 456 aaKnown RBP9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 OSER1Q9NX31 292 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 SMPD4Q9NXE4 827 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 TRPM5Q9NZQ8 1165 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 CHORDC1Q9UHD1 332 aaPredicted RBP9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 ARHGAP26Q9UNA1 814 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 ATP8B3O60423 1300 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 BICDL2A1A5D9 508 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 ANTXRLA6NF34 631 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 RNF225M0QZC1 329 aaPredicted RBP9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 LEFTY2O00292 366 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 PMM2O15305 246 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 CYP26A1O43174 497 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 COCHO43405 550 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 RTN3O95197 1032 aaPredicted RBP9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 FAM200BP0CF97 657 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 ACO1P21399 889 aaKnown RBP9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 NBL1P41271 181 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 RPS9P46781 194 aaKnown RBP9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 KPNA1P52294 538 aaPredicted RBP9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 MLLT6P55198 1093 aaPredicted RBP9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 MTAPQ13126 283 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 RUNX3Q13761 415 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 ITPRIPL2Q3MIP1 535 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 SNX30Q5VWJ9 437 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 PKN3Q6P5Z2 889 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 TTC30AQ86WT1 665 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 TFAP2BQ92481 460 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 TMEM176AQ96HP8 235 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 FAXDC2Q96IV6 333 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 KREMEN1Q96MU8 473 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 SLITRK1Q96PX8 696 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 C8orf33Q9H7E9 229 aaPredicted RBP9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 FBRSL1Q9HCM7 1045 aaKnown RBP9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 EVA1BQ9NVM1 165 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 PCDHGA11Q9Y5H2 935 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 CPQQ9Y646 472 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 R4GN57 208 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
HERPUD2-206ENST00000438224 ABCA7Q8IZY2 2146 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 MAN2B1O00754 1011 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 MDM4O15151 490 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 TBX18O95935 607 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 SP9P0CG40 484 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 MBL2P11226 248 aaPredicted RBP9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 DMDP11532 3685 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 TDGF1P13385 188 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 PFKLP17858 780 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 GJA4P35212 333 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 KIF11P52732 1056 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 APBA1Q02410 837 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 MESP2Q0VG99 397 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 CCINQ13939 588 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 ARHGAP17Q68EM7 881 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 FSTL4Q6MZW2 842 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 TSSK4Q6SA08 328 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 BHLHA9Q7RTU4 235 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 ASCL5Q7RTU5 278 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 SCD5Q86SK9 330 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 RALGPS2Q86X27 583 aaPredicted RBP9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 CCDC150Q8NCX0 1101 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 OSCP1Q8WVF1 389 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 OVCA2Q8WZ82 227 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 COL26A1Q96A83 441 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 CNOT6LQ96LI5 555 aaKnown RBP9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 HEXIM2Q96MH2 286 aaKnown RBP9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 NELL2Q99435 816 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 DUSP16Q9BY84 665 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 NUP62CLQ9H1M0 184 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 ECT2Q9H8V3 914 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 LMAN1LQ9HAT1 526 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 PRMT8Q9NR22 394 aaPredicted RBP9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 SPATA6Q9NWH7 488 aaPredicted RBP9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 THG1LQ9NWX6 298 aaKnown RBP9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 DUS2Q9NX74 493 aaKnown RBP9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 CFAP97Q9P2B7 532 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 RWDD2AQ9UIY3 292 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 NUDT5Q9UKK9 219 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 MRPS17Q9Y2R5 130 aaKnown RBP9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 GON4LQ3T8J9 2241 aa9.01□□□□□ -0.97
HERPUD2-206ENST00000438224 A0A1W2PQH9 124 aa9□□□□□ -0.97
HERPUD2-206ENST00000438224 ANKRD62A6NC57 917 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms