RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 MMGT1Q8N4V1 131 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 TPCN2Q8NHX9 752 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 FAR2Q96K12 515 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 ZIM3Q96PE6 472 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 KLF15Q9UIH9 416 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 O00370 1275 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 GCLCP48506 637 aaPredicted RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 MFSD10Q14728 455 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 TLK2Q86UE8 772 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 SLC20A1Q8WUM9 679 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 MTG1Q9BT17 334 aaPredicted RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 UBXN6Q9BZV1 441 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 KLC4Q9NSK0 619 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 LRRIQ3A6PVS8 624 aaPredicted RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CCNG1P51959 295 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CCL23P55773 120 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 PPM1LQ5SGD2 360 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 RDM1Q8NG50 284 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 TATDN2Q93075 761 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CMTM5Q96DZ9 223 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 MTFR1LQ9H019 292 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 EPN3Q9H201 632 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 AAR2Q9Y312 384 aaKnown RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 BCORL1Q5H9F3 1711 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 VDRP11473 427 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 CYP2W1Q8TAV3 490 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 TMEM176AQ96HP8 235 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 SEC16BQ96JE7 1060 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 MIEF1Q9NQG6 463 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 GPRC5DQ9NZD1 345 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 SNCAIPQ9Y6H5 919 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 KPNA3O00505 521 aaPredicted RBP10.65□□□□□ -0.7
SHPRH-206ENST00000438092 TRDMT1O14717 391 aaKnown RBP10.65□□□□□ -0.7
SHPRH-206ENST00000438092 CYP11B1P15538 503 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 SHROOM1Q2M3G4 852 aaPredicted RBP10.65□□□□□ -0.7
SHPRH-206ENST00000438092 RSPH1Q8WYR4 309 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 PPP1R3GB7ZBB8 358 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 YWHAQP27348 245 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 EDRF1Q3B7T1 1238 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 TFDP3Q5H9I0 405 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 SCUBE3Q8IX30 993 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 PPP1R2P1Q96PQ5 205 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 CCT8L2Q96SF2 557 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 EMILIN2Q9BXX0 1053 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 SCN3BQ9NY72 215 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 ZMYM5Q9UJ78 669 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 MCM8Q9UJA3 840 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 E9PBE3 544 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 TMEM253P0C7T8 217 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 SERPINB10P48595 397 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 SEC24CP53992 1094 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 MARSP56192 900 aaKnown RBP10.65□□□□□ -0.7
SHPRH-206ENST00000438092 CNTN2Q02246 1040 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 TIGD7Q6NT04 549 aaPredicted RBP10.65□□□□□ -0.7
SHPRH-206ENST00000438092 TRPC4APQ8TEL6 797 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 ADGRE3Q9BY15 652 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 RBM22Q9NW64 420 aaKnown RBP eCLIP10.65□□□□□ -0.7
SHPRH-206ENST00000438092 PCDHGA4Q9Y5G9 962 aa10.65□□□□□ -0.7
SHPRH-206ENST00000438092 HOXA2O43364 376 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 GLP2RO95838 553 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 USP17L7P0C7H9 530 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 FDPSP14324 419 aaKnown RBP10.65□□□□□ -0.71
SHPRH-206ENST00000438092 BDNFP23560 247 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 NDST1P52848 882 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 COLGALT1Q8NBJ5 622 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 TAS1R2Q8TE23 839 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 ZDHHC15Q96MV8 337 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 ERP44Q9BS26 406 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 IL25Q9H293 177 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 OLFML3Q9NRN5 406 aa10.65□□□□□ -0.71
SHPRH-206ENST00000438092 THG1LQ9NWX6 298 aaKnown RBP10.65□□□□□ -0.71
SHPRH-206ENST00000438092 KLHL2O95198 593 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 STIP1P31948 543 aaKnown RBP10.64□□□□□ -0.71
SHPRH-206ENST00000438092 FDFT1P37268 417 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 PSMC6P62333 389 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 YWHAZP63104 245 aaKnown RBP10.64□□□□□ -0.71
SHPRH-206ENST00000438092 CEP78Q5JTW2 689 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 ILDR2Q71H61 639 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.64□□□□□ -0.71
SHPRH-206ENST00000438092 PRUNE1Q86TP1 453 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 ITIH5Q86UX2 942 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 ZNF677Q86XU0 584 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 GRIN3AQ8TCU5 1115 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 CDY2AQ9Y6F7 541 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 CDY1Q9Y6F8 540 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 SSU72P8A0A1W2PR75 194 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 RASSF10A6NK89 507 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 FYNP06241 537 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 LHX1P48742 406 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 RUNX1T1Q06455 604 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 FBXO47Q5MNV8 452 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 OLFML2BQ68BL8 750 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 LUZP2Q86TE4 346 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 SYTL1Q8IYJ3 562 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 LGI2Q8N0V4 545 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 CGRRF1Q99675 332 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 ROGDIQ9GZN7 287 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 HSMCR30P0CW71 290 aa10.64□□□□□ -0.71
SHPRH-206ENST00000438092 ITGALP20701 1170 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms