RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 PLD5Q8N7P1 536 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 CCDC77Q9BR77 488 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 LRRC4Q9HBW1 653 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 PRDM4Q9UKN5 801 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 CDH9Q9ULB4 789 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 DAB1O75553 588 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 IGFBP6P24592 240 aaPredicted RBP26.77■■□□□ 1.88
CPNE1-216ENST00000437340 RPL22P35268 128 aaKnown RBP26.77■■□□□ 1.88
CPNE1-216ENST00000437340 MMP13P45452 471 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 MRPS5P82675 430 aaKnown RBP26.77■■□□□ 1.88
CPNE1-216ENST00000437340 ADCY1Q08828 1119 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 ADIGQ0VDE8 80 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 STAT4Q14765 748 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 SLC25A52Q3SY17 297 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 KIAA0319Q5VV43 1072 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 PQLC3Q8N755 202 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 MED10Q9BTT4 135 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 OSBPL7Q9BZF2 842 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 EPN3Q9H201 632 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 CRTAC1Q9NQ79 661 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 PAK6Q9NQU5 681 aaPredicted RBP26.77■■□□□ 1.88
CPNE1-216ENST00000437340 GPATCH2LQ9NWQ4 482 aa26.77■■□□□ 1.88
CPNE1-216ENST00000437340 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.76■■□□□ 1.88
CPNE1-216ENST00000437340 A0A1W2PQ45 241 aaPredicted RBP26.76■■□□□ 1.88
CPNE1-216ENST00000437340 A0A1W2PQY0 241 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 CFAP69A5D8W1 941 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 SMIM23A6NLE4 172 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 ATP5DP30049 168 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 CTCFP49711 727 aaPredicted RBP26.76■■□□□ 1.88
CPNE1-216ENST00000437340 CA9Q16790 459 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 CENPUQ71F23 418 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 C3orf58Q8NDZ4 430 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 PCDH19Q8TAB3 1148 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 BCAS4Q8TDM0 211 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 GLT1D1Q96MS3 346 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 SAYSD1Q9NPB0 183 aa26.76■■□□□ 1.88
CPNE1-216ENST00000437340 CLDN5O00501 218 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 ALOX15BO15296 676 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 FBXO21O94952 628 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 ZFXP17010 805 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-216ENST00000437340 TFE3P19532 575 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-216ENST00000437340 L1CAMP32004 1257 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 BCAR1P56945 870 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 YWHAZP63104 245 aaKnown RBP26.76■■□□□ 1.87
CPNE1-216ENST00000437340 GRIK3Q13003 919 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 DARS2Q6PI48 645 aaKnown RBP26.76■■□□□ 1.87
CPNE1-216ENST00000437340 TAOK1Q7L7X3 1001 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 PSTKQ8IV42 348 aaKnown RBP26.76■■□□□ 1.87
CPNE1-216ENST00000437340 FAM71DQ8N9W8 422 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 CPT1BQ92523 772 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 TRMT13Q9NUP7 481 aaKnown RBP26.76■■□□□ 1.87
CPNE1-216ENST00000437340 CACNG4Q9UBN1 327 aa26.76■■□□□ 1.87
CPNE1-216ENST00000437340 CASTOR2A6NHX0 329 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 PCSK1P29120 753 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 SLCO1A2P46721 670 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 LONRF1Q17RB8 773 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 NPNTQ6UXI9 565 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 SIX6OS1Q8N1H7 587 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 NAT8LQ8N9F0 302 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 NT5C3BQ969T7 300 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 CENPTQ96BT3 561 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 C9orf72Q96LT7 481 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 ADAM2Q99965 735 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 AP4E1Q9UPM8 1137 aa26.75■■□□□ 1.87
CPNE1-216ENST00000437340 BEST1O76090 585 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 HSPA8P11142 646 aaKnown RBP26.74■■□□□ 1.87
CPNE1-216ENST00000437340 ODC1P11926 461 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 CCL5P13501 91 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 NOS2P35228 1153 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 IFI35P80217 286 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-216ENST00000437340 DEFB106AQ8N104 65 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 RTP4Q96DX8 246 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 UROC1Q96N76 676 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 DEFB118Q96PH6 123 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 ADAM33Q9BZ11 813 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 C10orf88Q9H8K7 445 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 PRDM16Q9HAZ2 1276 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 KRT82Q9NSB4 513 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 A0A087WUV0 522 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-216ENST00000437340 TIGD5Q53EQ6 642 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 BNIPLQ7Z465 357 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 FAM35AQ86V20 835 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 MYCBPAPQ8TBZ2 947 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 FAM149B1Q96BN6 582 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 SLC2A13Q96QE2 648 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 NRDE2Q9H7Z3 1164 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 LGALS13Q9UHV8 139 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 STAP1Q9ULZ2 295 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 PHF24Q9UPV7 400 aa26.74■■□□□ 1.87
CPNE1-216ENST00000437340 BCLAF3A2AJT9 711 aaKnown RBP26.73■■□□□ 1.87
CPNE1-216ENST00000437340 H7C0C1 242 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 INPPL1O15357 1258 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 CYP11A1P05108 521 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 CYP2F1P24903 491 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 ATP5OP48047 213 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 HIF1AQ16665 826 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 C1orf228Q6PIY5 440 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 ZC3H18Q86VM9 953 aaKnown RBP26.73■■□□□ 1.87
CPNE1-216ENST00000437340 PCED1BQ96HM7 432 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 DHX35Q9H5Z1 703 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms