RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 SLC4A11Q8NBS3 891 aa18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 KCNV2Q8TDN2 545 aa18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 ERCC4Q92889 916 aaPredicted RBP18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 KLF16Q9BXK1 252 aaPredicted RBP18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 SEMA4GQ9NTN9 838 aa18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 CLIC5Q9NZA1 410 aa18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 DEC1Q9P2X7 70 aa18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 NAGPAQ9UK23 515 aa18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 MMP17Q9ULZ9 603 aa18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 USP3Q9Y6I4 520 aa18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 DMXL1Q9Y485 3027 aa18.48■□□□□ 0.55
SBDSP1-203ENST00000437201 A0A1W2PQH9 124 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 TRIM49BA6NDI0 452 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 ALDH1A2O94788 518 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 TBX18O95935 607 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 IRF1P10914 325 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 RARGP13631 454 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 SLC6A11P48066 632 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 CUL2Q13617 745 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 ANO4Q32M45 955 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 CCDC40Q4G0X9 1142 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 C10orf120Q5SQS8 335 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 ANKRD52Q8NB46 1076 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 TATDN2Q93075 761 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 SLC35C1Q96A29 364 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 ZC3H10Q96K80 434 aaKnown RBP18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 PARD6AQ9NPB6 346 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 WDR35Q9P2L0 1181 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 MAN1B1Q9UKM7 699 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 KIAA1257Q9ULG3 409 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 CIZ1Q9ULV3 898 aaPredicted RBP18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 ZNF510Q9Y2H8 683 aa18.47■□□□□ 0.55
SBDSP1-203ENST00000437201 TBC1D3BA6NDS4 549 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 PMM2O15305 246 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 RHOBTB1O94844 696 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 PGFP49763 221 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 ELF2Q15723 593 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 USP39Q53GS9 565 aaKnown RBP18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 SGO2Q562F6 1265 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 EOGTQ5NDL2 527 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 ISM2Q6H9L7 571 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 TRMT11Q7Z4G4 463 aaKnown RBP18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 XPO6Q96QU8 1125 aaKnown RBP18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 ARID3AQ99856 593 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 HESX1Q9UBX0 185 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 PCDHGA5Q9Y5G8 931 aa18.46■□□□□ 0.55
SBDSP1-203ENST00000437201 MYH10P35580 1976 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 GNA14O95837 355 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 HOXC13P31276 330 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 BCAT1P54687 386 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 COG7P83436 770 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 KDSRQ06136 332 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 CRY1Q16526 586 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 PRR23CQ6ZRP0 262 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 KBTBD6Q86V97 674 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 C12orf40Q86WS4 652 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 TMEM25Q86YD3 366 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 ETFBKMTQ8IXQ9 262 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 CCDC33Q8N5R6 958 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 NETO1Q8TDF5 533 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 RTKNQ9BST9 563 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 NMUR1Q9HB89 426 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 POLMQ9NP87 494 aaPredicted RBP18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 POLR3BQ9NW08 1133 aaPredicted RBP18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 OSER1Q9NX31 292 aa18.45■□□□□ 0.54
SBDSP1-203ENST00000437201 P4HA2O15460 535 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 TULP3O75386 442 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 EPN2O95208 641 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 KLF8O95600 359 aaPredicted RBP18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 TIE1P35590 1138 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 FMO5P49326 533 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 RAB41Q5JT25 222 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 KLHL10Q6JEL2 608 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 PIGZQ86VD9 579 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 ALLCQ8N6M5 410 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 NAT16Q8N8M0 369 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 IL17RCQ8NAC3 791 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 TXNDC5Q8NBS9 432 aaKnown RBP18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 NELFBQ8WX92 580 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 CNOT6LQ96LI5 555 aaKnown RBP18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 NT5C1BQ96P26 610 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 DCLK3Q9C098 648 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 STRIP2Q9ULQ0 834 aa18.44■□□□□ 0.54
SBDSP1-203ENST00000437201 XPO1O14980 1071 aaKnown RBP18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 GREM1O60565 184 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 FGFR1OPO95684 399 aaKnown RBP18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 VDRP11473 427 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 CD19P15391 556 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 CD44P16070 742 aaKnown RBP18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 KIR2DL1P43626 348 aaPredicted RBP18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 MORC3Q14149 939 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 PLK5Q496M5 336 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 GRAMD4Q6IC98 578 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 ANO7Q6IWH7 933 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 TTI2Q6NXR4 508 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 RSRC2Q7L4I2 434 aaKnown RBP18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 SCD5Q86SK9 330 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 RASSF3Q86WH2 238 aa18.43■□□□□ 0.54
SBDSP1-203ENST00000437201 MIB1Q86YT6 1006 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms