RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 WHAMMQ8TF30 809 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 KLF16Q9BXK1 252 aaPredicted RBP17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 NIF3L1Q9GZT8 377 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 CYLDQ9NQC7 956 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 TBC1D3BA6NDS4 549 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 GREM1O60565 184 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 CILPO75339 1184 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 TULP3O75386 442 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 ALDH1A2O94788 518 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 CAVIN2O95810 425 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 IRF1P10914 325 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 GTF2H1P32780 548 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 ATP5C1P36542 298 aaKnown RBP17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 ZCWPW2Q504Y3 356 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 EOGTQ5NDL2 527 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 PMS2CLQ68D20 193 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 TTC30AQ86WT1 665 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 OLIG1Q8TAK6 271 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 KCNV2Q8TDN2 545 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 TMEM8AQ9HCN3 771 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 PNPLA8Q9NP80 782 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 OSER1Q9NX31 292 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 DEC1Q9P2X7 70 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 CEP295Q9C0D2 2601 aa17.07■□□□□ 0.32
AC055876.3-201ENST00000431496 THADAQ6YHU6 1953 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 ADAM23O75077 832 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 CD58P19256 250 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 ACO1P21399 889 aaKnown RBP17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 ANO4Q32M45 955 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 EDRF1Q3B7T1 1238 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 PREPLQ4J6C6 727 aaPredicted RBP17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 KRT39Q6A163 491 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 TCEAL6Q6IPX3 200 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 KLHDC10Q6PID8 442 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 CCDC150Q8NCX0 1101 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 TCEAL3Q969E4 200 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 JAKMIP2Q96AA8 810 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 CNTNAP3BQ96NU0 1288 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 CNTNAP3Q9BZ76 1288 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 DNAI2Q9GZS0 605 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 MMRN2Q9H8L6 949 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 POLMQ9NP87 494 aaPredicted RBP17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 ZDHHC4Q9NPG8 344 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 PCDHA5Q9Y5H7 936 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 LAMA1P25391 3075 aa17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 MAP1BP46821 2468 aaKnown RBP17.06■□□□□ 0.32
AC055876.3-201ENST00000431496 CYP26A1O43174 497 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 BCKDHBP21953 392 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 KIF11P52732 1056 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 NUDT18Q6ZVK8 323 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 ZNF276Q8N554 614 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 SEMA4DQ92854 862 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 FAXDC2Q96IV6 333 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 DUSP16Q9BY84 665 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 NMUR1Q9HB89 426 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 GDPD2Q9HCC8 539 aa17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.05■□□□□ 0.32
AC055876.3-201ENST00000431496 NUP205Q92621 2012 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 A0A1W2PQH9 124 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 TRIM24O15164 1050 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 RARGP13631 454 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 P2RY2P41231 377 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 PLA2G4AP47712 749 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 GOLGA8FQ08AF8 430 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 GOLGA8DPQ0D2H9 430 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 PPP1R26Q5T8A7 1209 aaPredicted RBP17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 RNF43Q68DV7 783 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 SCD5Q86SK9 330 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 SMYD4Q8IYR2 804 aaPredicted RBP17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 FBXL13Q8NEE6 735 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 RLN3Q8WXF3 142 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 EEF2KMTQ96G04 330 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 CCDC34Q96HJ3 373 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 HEXIM2Q96MH2 286 aaKnown RBP17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 LSM14BQ9BX40 385 aaKnown RBP17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 MARK1Q9P0L2 795 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 WDR35Q9P2L0 1181 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 DNMT3LQ9UJW3 386 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 LSM7Q9UK45 103 aaKnown RBP17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 NUDT5Q9UKK9 219 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 HCN2Q9UL51 889 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 STARD13Q9Y3M8 1113 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 USP3Q9Y6I4 520 aa17.04■□□□□ 0.32
AC055876.3-201ENST00000431496 CETN3O15182 167 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 STX10O60499 249 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 PSEN1P49768 467 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 BYSLQ13895 437 aaKnown RBP17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 ZNF394Q53GI3 561 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 C10orf120Q5SQS8 335 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 C10orf76Q5T2E6 689 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 GRAMD4Q6IC98 578 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 CCDC186Q7Z3E2 898 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 TRMT11Q7Z4G4 463 aaKnown RBP17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 TTC39CQ8N584 583 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 FRMD1Q8N878 549 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 ZNF513Q8N8E2 541 aaPredicted RBP17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 TERB1Q8NA31 727 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 HMGB4Q8WW32 186 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 BBS2Q9BXC9 721 aa17.03■□□□□ 0.32
AC055876.3-201ENST00000431496 CISHQ9NSE2 258 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms