RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	DAB2IP	Q5VWQ8	1189 aa		18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	RHBDF2	Q6PJF5	856 aa		18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	GPRIN1	Q7Z2K8	1008 aa		18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	CCDC150	Q8NCX0	1101 aa		18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	FBXL13	Q8NEE6	735 aa		18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	CCDC26	Q8TAB7	109 aa		18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	ERCC4	Q92889	916 aa	Predicted RBP	18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	OTUB2	Q96DC9	234 aa		18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	FAM124B	Q9H5Z6	455 aa	Predicted RBP	18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	RAB20	Q9NX57	234 aa		18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738	TBC1D14	Q9P2M4	693 aa		18.73	■□□□□ 0.59
MRPL28-203	ENST00000429738		K7EQS6	105 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	SCAMP3	O14828	347 aa	Known RBP	18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	GIPC1	O14908	333 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	STX10	O60499	249 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	SMC2	O95347	1197 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	CD58	P19256	250 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	EIF2D	P41214	584 aa	Known RBP	18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	DGKE	P52429	567 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	FKBP3	Q00688	224 aa	Known RBP	18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	ANKRD40	Q6AI12	368 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	C11orf74	Q86VG3	221 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	SMARCE1	Q969G3	411 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	GTPBP4	Q9BZE4	634 aa	Known RBP	18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	CYLD	Q9NQC7	956 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	TLR8	Q9NR97	1041 aa	Known RBP	18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	SCML2	Q9UQR0	700 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	COQ4	Q9Y3A0	265 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	BAHCC1	Q9P281	2608 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	THADA	Q6YHU6	1953 aa		18.72	■□□□□ 0.59
MRPL28-203	ENST00000429738	MYO18A	Q92614	2054 aa	Known RBP	18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	C1QTNF9B	B2RNN3	333 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	TLR5	O60602	858 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	C1QTNF9	P0C862	333 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	CHRM1	P11229	460 aa	Predicted RBP	18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	GBP1	P32455	592 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	LRRC63	Q05C16	580 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	CBWD6	Q4V339	395 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	USP39	Q53GS9	565 aa	Known RBP	18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	CBWD3	Q5JTY5	395 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	CBWD5	Q5RIA9	395 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	UNQ6494/PRO21346	Q6UXR6	183 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	C12orf40	Q86WS4	652 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	TTC39C	Q8N584	583 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	USP33	Q8TEY7	942 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	WBP2	Q969T9	261 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	TSG101	Q99816	390 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	OSER1	Q9NX31	292 aa		18.71	■□□□□ 0.59
MRPL28-203	ENST00000429738	ASCC3	Q8N3C0	2202 aa	Known RBP	18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	ZFYVE26	Q68DK2	2539 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	PCNX2	A6NKB5	2137 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738		A0A0A0MRY4	1105 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	LNP1	A1A4G5	178 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	TRIM49B	A6NDI0	452 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	ANTXRL	A6NF34	631 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	KHNYN	O15037	678 aa	Known RBP	18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	GREM1	O60565	184 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	KIF11	P52732	1056 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	MESP2	Q0VG99	397 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	SH3PXD2A	Q5TCZ1	1133 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	PMS2CL	Q68D20	193 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	KDF1	Q8NAX2	398 aa	Predicted RBP	18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	SLC4A11	Q8NBS3	891 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	TSTD1	Q8NFU3	115 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	ARID3A	Q99856	593 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	DUSP16	Q9BY84	665 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	NMUR1	Q9HB89	426 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	CISH	Q9NSE2	258 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	HOOK1	Q9UJC3	728 aa	Known RBP	18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	ZMIZ1	Q9ULJ6	1067 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	WASF3	Q9UPY6	502 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	INVS	Q9Y283	1065 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	SH3BP1	Q9Y3L3	701 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	USP3	Q9Y6I4	520 aa		18.7	■□□□□ 0.58
MRPL28-203	ENST00000429738	CYP26A1	O43174	497 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	TBX18	O95935	607 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	ADH1C	P00326	375 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	ADH5	P11766	374 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	CEACAM1	P13688	526 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	CSRP1	P21291	193 aa	Known RBP	18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	ACO1	P21399	889 aa	Known RBP	18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	SLC6A11	P48066	632 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	RAD23B	P54727	409 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	ZNF252P-AS1	Q0IIN9	211 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	FOXC1	Q12948	553 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	ZNF394	Q53GI3	561 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	LY6G5C	Q5SRR4	150 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	KLHDC10	Q6PID8	442 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	BBS7	Q8IWZ6	715 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	ETFBKMT	Q8IXQ9	262 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	PHTF2	Q8N3S3	785 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	TATDN2	Q93075	761 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	SLC35C1	Q96A29	364 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	TMEM176A	Q96HP8	235 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	KLF16	Q9BXK1	252 aa	Predicted RBP	18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	DNAI2	Q9GZS0	605 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	TMEM9B	Q9NQ34	198 aa		18.69	■□□□□ 0.58
MRPL28-203	ENST00000429738	HOXC11	O43248	304 aa	Predicted RBP	18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	GAD2	Q05329	585 aa		18.68	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms