RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 GLT8D2Q9H1C3 349 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 PARVGQ9HBI0 331 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 XAB2Q9HCS7 855 aaKnown RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 GINM1Q9NU53 330 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 GOLGA8SH3BPF8 625 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 GOLGA8MH3BSY2 632 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 CCDC130P13994 396 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 ADRA2BP18089 450 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 TCF7P36402 384 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-206ENST00000428313 VAMP7P51809 220 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 YWHAGP61981 247 aaKnown RBP eCLIP16.65■□□□□ 0.26
C9orf3-206ENST00000428313 ATP1A4Q13733 1029 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 SUSD4Q5VX71 490 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 EGFLAMQ63HQ2 1017 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 OGFOD2Q6N063 350 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 IQCF2Q8IXL9 164 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 NAT8LQ8N9F0 302 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.65■□□□□ 0.26
C9orf3-206ENST00000428313 KBTBD7Q8WVZ9 684 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 CCDC138Q96M89 665 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 ZNF512Q96ME7 567 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-206ENST00000428313 FIZ1Q96SL8 496 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 DOK1Q99704 481 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 RTKNQ9BST9 563 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 OSBPL11Q9BXB4 747 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 ZNF395Q9H8N7 513 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-206ENST00000428313 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-206ENST00000428313 SLC8A2Q9UPR5 921 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 ERGIC3Q9Y282 383 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 NOX1Q9Y5S8 564 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 PRSS51A0A1B0GVH4 220 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 UGT1A9O60656 530 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 SPAG6O75602 509 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 PIAS1O75925 651 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 BPGMP07738 259 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 UGT1A6P19224 532 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 CD58P19256 250 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 UGT1A1P22309 533 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 UGT1A4P22310 534 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 TKTP29401 623 aaKnown RBP16.65■□□□□ 0.26
C9orf3-206ENST00000428313 PRDX5P30044 214 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 UGT1A3P35503 534 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 UGT1A5P35504 534 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 GSSP48637 474 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 DLG4P78352 724 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 DPYSQ14117 519 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 PHKG1Q16816 387 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 ARL13BQ3SXY8 428 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 ADAMTS16Q8TE57 1224 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 TMEM174Q8WUU8 243 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 TRUB1Q8WWH5 349 aaKnown RBP16.65■□□□□ 0.26
C9orf3-206ENST00000428313 CTRCQ99895 268 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 PSTPIP2Q9H939 334 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 UGT1A7Q9HAW7 530 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 UGT1A10Q9HAW8 530 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 UGT1A8Q9HAW9 530 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 DNAJC28Q9NX36 388 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 ZBTB1Q9Y2K1 713 aa16.65■□□□□ 0.26
C9orf3-206ENST00000428313 CDK5RAP2Q96SN8 1893 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 STRCP1A6NGW2 1772 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 PLIN4Q96Q06 1357 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 CCDC195A0A1B0GUA6 201 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 TMEM114B3SHH9 223 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 UNGP13051 313 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-206ENST00000428313 C6orf183Q5T699 404 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
C9orf3-206ENST00000428313 SLC7A5P1Q8MH63 180 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 LILRA2Q8N149 483 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 PIWIL2Q8TC59 973 aaKnown RBP16.64■□□□□ 0.25
C9orf3-206ENST00000428313 PTCD2Q8WV60 388 aaKnown RBP16.64■□□□□ 0.25
C9orf3-206ENST00000428313 CPT1BQ92523 772 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 ZNF597Q96LX8 424 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 C20orf27Q9GZN8 174 aa16.64■□□□□ 0.25
C9orf3-206ENST00000428313 DDX60LQ5H9U9 1706 aaKnown RBP16.64■□□□□ 0.25
C9orf3-206ENST00000428313 TRIM64BA6NI03 449 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 SFI1A8K8P3 1242 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 PTPN7P35236 360 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 MRPS5P82675 430 aaKnown RBP16.63■□□□□ 0.25
C9orf3-206ENST00000428313 FRMD7Q6ZUT3 714 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 SAPCD2Q86UD0 394 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 PDIK1LQ8N165 341 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 GALNT4Q8N4A0 578 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 PSD2Q9BQI7 771 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 DCUN1D5Q9BTE7 237 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 NDEL1Q9GZM8 345 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 COPS7BQ9H9Q2 264 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-206ENST00000428313 CLK4Q9HAZ1 481 aaKnown RBP16.63■□□□□ 0.25
C9orf3-206ENST00000428313 VTA1Q9NP79 307 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 DKK3Q9UBP4 350 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 VPS28Q9UK41 221 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 AP4S1Q9Y587 144 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 SLC30A1Q9Y6M5 507 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 FRMPD2Q68DX3 1309 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-206ENST00000428313 ARHGEF37A1IGU5 675 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 TRIM49D1C9J1S8 452 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 DGKIO75912 1065 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 KRT37O76014 449 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 ZNF26P17031 533 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms