RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 UGT1A8Q9HAW9 530 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 C6orf50Q9HD87 102 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 MLXIPLQ9NP71 852 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 CD320Q9NPF0 282 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 AVENQ9NQS1 362 aaPredicted RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SLC38A7Q9NVC3 462 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 THAP1Q9NVV9 213 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 MKS1Q9NXB0 559 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 LIMD1Q9UGP4 676 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 TBK1Q9UHD2 729 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 VPS28Q9UK41 221 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PPM1HQ9ULR3 514 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 INPP5FQ9Y2H2 1132 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PCDHA3Q9Y5H8 950 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 NOX1Q9Y5S8 564 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PLCH1Q4KWH8 1693 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ASTN2O75129 1339 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 MN1Q10571 1320 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 FAM205AQ6ZU69 1335 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TOGARAM1Q9Y4F4 1720 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ARHGEF35A5YM69 484 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 AP3B1O00203 1094 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 PSMD12O00232 456 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 EML1O00423 815 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 HAT1O14929 419 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 COBLO75128 1261 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 FAM155BO75949 473 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CLPXO76031 633 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 GSNP06396 782 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 COL6A2P12110 1019 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 GZMAP12544 262 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 POLR2CP19387 275 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CCNA2P20248 432 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 PROZP22891 400 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 FBLN1P23142 703 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 RPA1P27694 616 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 GUCY1A2P33402 732 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 RPA3P35244 121 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 GRK3P35626 688 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 GNL1P36915 607 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 IST1P53990 364 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ARL4CP56559 192 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 JAM2P57087 298 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 YWHAGP61981 247 aaKnown RBP eCLIP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CTAG1AP78358 180 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 PRKCQQ04759 706 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 NIPAL4Q0D2K0 466 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CDC20Q12834 499 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 PTP4A2Q12974 167 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TLR1Q15399 786 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 MAPRE2Q15555 327 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TSC22D1Q15714 1073 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 KCNJ8Q15842 424 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CCNG2Q16589 344 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 INSCQ1MX18 579 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TUSC1Q2TAM9 212 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CEP55Q53EZ4 464 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 EFHC2Q5JST6 749 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 FAM209AQ5JX71 171 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZBTB41Q5SVQ8 909 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TMTC4Q5T4D3 741 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 STXBP5Q5T5C0 1151 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF618Q5T7W0 954 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 IZUMO3Q5VZ72 239 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 BTBD8Q5XKL5 378 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TMEM214Q6NUQ4 689 aaKnown RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TREML4Q6UXN2 200 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 C4orf22Q6V702 233 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CCDC81Q6ZN84 652 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 IDO2Q6ZQW0 420 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 GSTA5Q7RTV2 222 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ATG9AQ7Z3C6 839 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 KBTBD6Q86V97 674 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 PM20D2Q8IYS1 436 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 HACE1Q8IYU2 909 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 METTL25Q8N6Q8 603 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ABTB2Q8N961 1025 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF511Q8NB15 262 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 KCNH5Q8NCM2 988 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 GABPB2Q8TAK5 448 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CHAC2Q8WUX2 184 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 STON2Q8WXE9 905 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 RAD54LQ92698 747 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ATP2A3Q93084 1043 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 C8orf48Q96LL4 319 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 NLRP3Q96P20 1036 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 STRBPQ96SI9 672 aaKnown RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TCF12Q99081 682 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZKSCAN3Q9BRR0 538 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 UQCC2Q9BRT2 126 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CNPY3Q9BT09 278 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 MYL10Q9BUA6 226 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ANKRD60Q9BZ19 345 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TRIM15Q9C019 465 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 PUS7LQ9H0K6 701 aaKnown RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 SMARCAD1Q9H4L7 1026 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 SLA2Q9H6Q3 261 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 KIAA1586Q9HCI6 787 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF304Q9HCX3 659 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms