RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 TMEM253P0C7T8 217 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 CEBPBP17676 345 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 CDC25CP30307 473 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 YWHAZP63104 245 aaKnown RBP16.46■□□□□ 0.23
DDX55-203ENST00000421670 GPC5P78333 572 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 EFHC1Q5JVL4 640 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 PLEKHA7Q6IQ23 1121 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 EMC1Q8N766 993 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 LEMD2Q8NC56 503 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 JOSD2Q8TAC2 188 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 ITFG1Q8TB96 612 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 ATRIPQ8WXE1 791 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 GOLGA1Q92805 767 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 SELENOOQ9BVL4 669 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 CCSER2Q9H7U1 834 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 TRPC7Q9HCX4 862 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 PARVAQ9NVD7 372 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 ADGRG1Q9Y653 693 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
DDX55-203ENST00000421670 CYP1A2P05177 515 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 FYNP06241 537 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 KRT3P12035 628 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 FLT3P36888 993 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 VAV2P52735 878 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 RPL7AP62424 266 aaKnown RBP16.45■□□□□ 0.22
DDX55-203ENST00000421670 KRT83P78385 493 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 MAMLD1Q13495 774 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 TEAD2Q15562 447 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 BTBD8Q5XKL5 378 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 TXNDC8Q6A555 127 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 TRNP1Q6NT89 227 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 GET4Q7L5D6 327 aaPredicted RBP16.45■□□□□ 0.22
DDX55-203ENST00000421670 KIAA1328Q86T90 577 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 ARHGAP18Q8N392 663 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 MRPS31Q92665 395 aaKnown RBP16.45■□□□□ 0.22
DDX55-203ENST00000421670 HLA-CQ95604 372 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 TRIM7Q9C029 511 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 POPDC2Q9HBU9 364 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 WDR6Q9NNW5 1121 aaKnown RBP16.45■□□□□ 0.22
DDX55-203ENST00000421670 LUC7LQ9NQ29 371 aaKnown RBP16.45■□□□□ 0.22
DDX55-203ENST00000421670 AVENQ9NQS1 362 aaPredicted RBP16.45■□□□□ 0.22
DDX55-203ENST00000421670 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDX55-203ENST00000421670 TMEM59LQ9UK28 342 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 NAALADL1Q9UQQ1 740 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 MRPS23Q9Y3D9 190 aaKnown RBP16.45■□□□□ 0.22
DDX55-203ENST00000421670 USP15Q9Y4E8 981 aaPredicted RBP16.45■□□□□ 0.22
DDX55-203ENST00000421670 SCINQ9Y6U3 715 aa16.45■□□□□ 0.22
DDX55-203ENST00000421670 VCANP13611 3396 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 TLR5O60602 858 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 DAB1O75553 588 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 FGF19O95750 216 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 NCAM1P13591 858 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 RARGP13631 454 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 FSHRP23945 695 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 SCNN1AP37088 669 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 PPP3CCP48454 512 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 PSEN1P49768 467 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 ATAT1Q5SQI0 421 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 SNX30Q5VWJ9 437 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 SYPL2Q5VXT5 272 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 DEFB106AQ8N104 65 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 RIPOR3Q96MK2 946 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 SLC2A13Q96QE2 648 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 NUP85Q9BW27 656 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 LACRTQ9GZZ8 138 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 POMKQ9H5K3 350 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 ABCC13Q9NSE7 274 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 ASNSD1Q9NWL6 643 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 INTUQ9ULD6 942 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 PYCARDQ9ULZ3 195 aa16.44■□□□□ 0.22
DDX55-203ENST00000421670 GRXCR2A6NFK2 248 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 SIGLEC16A6NMB1 481 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 ZNF197O14709 1029 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 CAPN9O14815 690 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 MDM4O15151 490 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 TBX18O95935 607 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 GLI1P08151 1106 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 RFC1P35251 1148 aaPredicted RBP16.43■□□□□ 0.22
DDX55-203ENST00000421670 PITX1P78337 314 aaPredicted RBP16.43■□□□□ 0.22
DDX55-203ENST00000421670 DCAF6Q58WW2 860 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 GPR158Q5T848 1215 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 DCUN1D2Q6PH85 259 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 POTEHQ6S545 545 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 RSRC2Q7L4I2 434 aaKnown RBP16.43■□□□□ 0.22
DDX55-203ENST00000421670 MAB21L3Q8N8X9 362 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 SLC22A12Q96S37 553 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 SLITRK6Q9H5Y7 841 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 OSGEPQ9NPF4 335 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 PRDM6Q9NQX0 595 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 CLIC5Q9NZA1 410 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 CTTNBP2NLQ9P2B4 639 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 TRIM10Q9UDY6 481 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 COG5Q9UP83 839 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 COCHO43405 550 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 OAS1P00973 400 aaKnown RBP16.43■□□□□ 0.22
DDX55-203ENST00000421670 CCDC175P0C221 793 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 RALAP11233 206 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 MTHFRP42898 656 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms