RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 OSER1Q9NX31 292 aa13.08□□□□□ -0.32
TMEM53-206ENST00000420706 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.08□□□□□ -0.32
TMEM53-206ENST00000420706 TRPM5Q9NZQ8 1165 aa13.08□□□□□ -0.32
TMEM53-206ENST00000420706 NAALADL1Q9UQQ1 740 aa13.08□□□□□ -0.32
TMEM53-206ENST00000420706 MACROD2A1Z1Q3 448 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 ZNF840PA6NDX5 716 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 MYO1FO00160 1098 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 NCK2O43639 380 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 TADA3O75528 432 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 SRGAP2BP0DMP2 458 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 RARGP13631 454 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 GPD1P21695 349 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 GABRR2P28476 465 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 NOS2P35228 1153 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 MATKP42679 507 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 EPHA5P54756 1037 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 NAP1L1P55209 391 aaKnown RBP13.07□□□□□ -0.32
TMEM53-206ENST00000420706 OGDHQ02218 1023 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 COL19A1Q14993 1142 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 PABPC1LQ4VXU2 614 aaKnown RBP13.07□□□□□ -0.32
TMEM53-206ENST00000420706 SYPL2Q5VXT5 272 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 SYCE2Q6PIF2 218 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 GAREM2Q75VX8 874 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 ZNF276Q8N554 614 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 TPCN2Q8NHX9 752 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 FNIP1Q8TF40 1166 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 MYLIPQ8WY64 445 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 SMG7Q92540 1137 aaKnown RBP13.07□□□□□ -0.32
TMEM53-206ENST00000420706 EDEM1Q92611 657 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 GOLGA1Q92805 767 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 BTBD6Q96KE9 485 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 CALR3Q96L12 384 aaKnown RBP13.07□□□□□ -0.32
TMEM53-206ENST00000420706 ASAH2Q9NR71 780 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 MTMR10Q9NXD2 777 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 CLIC5Q9NZA1 410 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 CLEC1BQ9P126 229 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 ANAPC7Q9UJX3 599 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 MYO16Q9Y6X6 1858 aa13.07□□□□□ -0.32
TMEM53-206ENST00000420706 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
TMEM53-206ENST00000420706 LAMA3Q16787 3333 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 DPYSL4O14531 572 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 CAPN9O14815 690 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 MOCS3O95396 460 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 RHOP08100 348 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 RALAP11233 206 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 MYL4P12829 197 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 NCAM1P13591 858 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 PDGFRAP16234 1089 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 HOXB8P17481 243 aaPredicted RBP13.06□□□□□ -0.32
TMEM53-206ENST00000420706 LTBRP36941 435 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 ZNF143P52747 638 aaPredicted RBP13.06□□□□□ -0.32
TMEM53-206ENST00000420706 DLX2Q07687 328 aaPredicted RBP13.06□□□□□ -0.32
TMEM53-206ENST00000420706 CCDC14Q49A88 953 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 DCAF6Q58WW2 860 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 RARS2Q5T160 578 aaKnown RBP13.06□□□□□ -0.32
TMEM53-206ENST00000420706 TMC5Q6UXY8 1006 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 GRASPQ7Z6J2 395 aaPredicted RBP13.06□□□□□ -0.32
TMEM53-206ENST00000420706 GPR149Q86SP6 731 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 ZSCAN30Q86W11 494 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 LEMD2Q8NC56 503 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 GUCD1Q96NT3 240 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 NPY6RQ99463 290 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 TRIM62Q9BVG3 475 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
TMEM53-206ENST00000420706 PIDD1Q9HB75 910 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMEM53-206ENST00000420706 CLDND1Q9NY35 253 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 IP6K2Q9UHH9 426 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 NUDT5Q9UKK9 219 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 DOCK6Q96HP0 2047 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 NOTCH4Q99466 2003 aa13.06□□□□□ -0.32
TMEM53-206ENST00000420706 NRG2O14511 850 aaPredicted RBP13.05□□□□□ -0.32
TMEM53-206ENST00000420706 MOSPD3O75425 235 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 FGF19O95750 216 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 PSMA2P25787 234 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 CDC25CP30307 473 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 SDC4P31431 198 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 CCR2P41597 374 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 PTPN9P43378 593 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 NTHL1P78549 312 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 ZNF252P-AS1Q0IIN9 211 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 PIGHQ14442 188 aaPredicted RBP13.05□□□□□ -0.32
TMEM53-206ENST00000420706 MESDQ14696 234 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 IFI16Q16666 785 aaKnown RBP13.05□□□□□ -0.32
TMEM53-206ENST00000420706 PRSS36Q5K4E3 855 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 PDZD4Q76G19 769 aaPredicted RBP13.05□□□□□ -0.32
TMEM53-206ENST00000420706 CENPIQ92674 756 aaPredicted RBP13.05□□□□□ -0.32
TMEM53-206ENST00000420706 NT5C3BQ969T7 300 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 PABPC5Q96DU9 382 aaKnown RBP13.05□□□□□ -0.32
TMEM53-206ENST00000420706 CFAP57Q96MR6 1250 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 APOL5Q9BWW9 433 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 S1PR5Q9H228 398 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 ATXN3LQ9H3M9 355 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 RRN3Q9NYV6 651 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 LCMT1Q9UIC8 334 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 STAP1Q9ULZ2 295 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 ANAPC1Q9H1A4 1944 aa13.05□□□□□ -0.32
TMEM53-206ENST00000420706 CHD9Q3L8U1 2897 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms