RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 WHRNQ9P202 907 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 ATP11BQ9Y2G3 1177 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 REXO2Q9Y3B8 237 aaKnown RBP13.67□□□□□ -0.22
BDNF-208ENST00000418212 CCT8L1PA6NM43 557 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 O00370 1275 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
BDNF-208ENST00000418212 ALDH2P05091 517 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 LHX1P48742 406 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 ST8SIA6P61647 398 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 PLIN5Q00G26 463 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 HIC1Q14526 733 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 NFE2Q16621 373 aaPredicted RBP13.67□□□□□ -0.22
BDNF-208ENST00000418212 PREPLQ4J6C6 727 aaPredicted RBP13.67□□□□□ -0.22
BDNF-208ENST00000418212 TTC39BQ5VTQ0 682 aaPredicted RBP13.67□□□□□ -0.22
BDNF-208ENST00000418212 FAM171A1Q5VUB5 890 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 TMC7Q7Z402 723 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 IRF2BP2Q7Z5L9 587 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 COLGALT1Q8NBJ5 622 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 NETO2Q8NC67 525 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 IL1RL2Q9HB29 575 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 NDE1Q9NXR1 346 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 PKP3Q9Y446 797 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.67□□□□□ -0.22
BDNF-208ENST00000418212 SUPT7LO94864 414 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 MYBL2P10244 700 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 CDC25CP30307 473 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 PPIL2Q13356 520 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 ZNF177Q13360 481 aaPredicted RBP13.67□□□□□ -0.22
BDNF-208ENST00000418212 SLC30A9Q6PML9 568 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 USP50Q70EL3 339 aaPredicted RBP13.67□□□□□ -0.22
BDNF-208ENST00000418212 ARRDC4Q8NCT1 418 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 GIPC2Q8TF65 315 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 SENP8Q96LD8 212 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 MTG1Q9BT17 334 aaPredicted RBP13.67□□□□□ -0.22
BDNF-208ENST00000418212 TMBIM4Q9HC24 238 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 NT5MQ9NPB1 228 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 PIK3C2AO00443 1686 aa13.67□□□□□ -0.22
BDNF-208ENST00000418212 MANSC4A6NHS7 340 aaPredicted RBP13.66□□□□□ -0.22
BDNF-208ENST00000418212 MLH1P40692 756 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 WSCD1Q658N2 575 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 IQSEC1Q6DN90 963 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 BATF3Q9NR55 127 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 CFAP73A6NFT4 308 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 ANXA9O76027 345 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 EGFRP00533 1210 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 HIST1H2AGP0C0S8 130 aaPredicted RBP13.66□□□□□ -0.22
BDNF-208ENST00000418212 USP17L7P0C7H9 530 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 ETS1P14921 441 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 HIST1H2ADP20671 130 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 TARSP26639 723 aaKnown RBP13.66□□□□□ -0.22
BDNF-208ENST00000418212 SLC11A2P49281 568 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 ZNF268Q14587 947 aaPredicted RBP13.66□□□□□ -0.22
BDNF-208ENST00000418212 KCNT2Q6UVM3 1135 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 TMC3Q7Z5M5 1100 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 ATP6V0D2Q8N8Y2 350 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 HIST1H2AHQ96KK5 128 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 HIST1H2AJQ99878 128 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 H2AFJQ9BTM1 129 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 UBXN6Q9BZV1 441 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 UTP6Q9NYH9 597 aaKnown RBP13.66□□□□□ -0.22
BDNF-208ENST00000418212 SMAPO00193 183 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 CBX4O00257 560 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 PYGBP11216 843 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 FMO1Q01740 532 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 SNX17Q15036 470 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 PDCD2Q16342 344 aaPredicted RBP13.66□□□□□ -0.22
BDNF-208ENST00000418212 LONP2Q86WA8 852 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 FAM71AQ8IYT1 594 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 MTBPQ96DY7 904 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 HAUS8Q9BT25 410 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 ULBP1Q9BZM6 244 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 IARS2Q9NSE4 1012 aaKnown RBP13.66□□□□□ -0.22
BDNF-208ENST00000418212 HEY2Q9UBP5 337 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 PHTF1Q9UMS5 762 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 FAF1Q9UNN5 650 aaPredicted RBP13.66□□□□□ -0.22
BDNF-208ENST00000418212 SUPT3HB4E1H0 165 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 NKRFO15226 690 aaKnown RBP eCLIP13.66□□□□□ -0.22
BDNF-208ENST00000418212 SUPT3HO75486 399 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 RHOBTB1O94844 696 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
BDNF-208ENST00000418212 SERPIND1P05546 499 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 SCNN1BP51168 640 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 ARHGEF7Q14155 803 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 KDM7AQ6ZMT4 941 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 ADCK2Q7Z695 626 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 MFN1Q8IWA4 741 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 ICA1LQ8NDH6 482 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 SEMA4DQ92854 862 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 YME1L1Q96TA2 773 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 RNPEPQ9H4A4 650 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 SLC13A4Q9UKG4 626 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 C3P01024 1663 aa13.66□□□□□ -0.22
BDNF-208ENST00000418212 AP3B1O00203 1094 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 ZNF197O14709 1029 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 MBL2P11226 248 aaPredicted RBP13.65□□□□□ -0.22
BDNF-208ENST00000418212 RBL1P28749 1068 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 ABCG1P45844 678 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 TRADDQ15628 312 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms