RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 CCDC130P13994 396 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 PTPN1P18031 435 aaKnown RBP13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 FSHRP23945 695 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 IGFBP6P24592 240 aaPredicted RBP13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 ACAT1P24752 427 aaKnown RBP13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 PCSK1P29120 753 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 PAFAH1B1P43034 410 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 SLC8A3P57103 927 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 ARHGAP17Q68EM7 881 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 ZC3H14Q6PJT7 736 aaKnown RBP13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 PRSS55Q6UWB4 352 aaPredicted RBP13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 LIMS2Q7Z4I7 341 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 CTAGE6Q86UF2 777 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 NT5DC3Q86UY8 548 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 CTAGE4Q8IX94 777 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 THEM5Q8N1Q8 247 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 DCLK2Q8N568 766 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 B3GALNT2Q8NCR0 500 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 C3orf58Q8NDZ4 430 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 PJA1Q8NG27 643 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 PBKQ96KB5 322 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 LPIN3Q9BQK8 851 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 WDR35Q9P2L0 1181 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 ADAM28Q9UKQ2 775 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 ALG6Q9Y672 507 aa13.83□□□□□ -0.19
HLA-DMB-258ENST00000418107 ZNF185O15231 689 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 TADA2AO75478 443 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 COMTP21964 271 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 SSR1P43307 286 aaKnown RBP13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 RGS7P49802 495 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 NTHL1P78549 312 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 PTP4A2Q12974 167 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 PDCLQ13371 301 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 MAMLD1Q13495 774 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 PTPN20Q4JDL3 420 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 MDH1BQ5I0G3 518 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 RTP2Q5QGT7 225 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 OR6B2Q6IFH4 312 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 PLEKHA7Q6IQ23 1121 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 PARM1Q6UWI2 310 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 GRASPQ7Z6J2 395 aaPredicted RBP13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 GPR65Q8IYL9 337 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 UBE2Q2Q8WVN8 375 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 RUBCNQ92622 972 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 FGF14Q92915 247 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 SYT15Q9BQS2 421 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 NME7Q9Y5B8 376 aa13.83□□□□□ -0.2
HLA-DMB-258ENST00000418107 CACNA1IQ9P0X4 2223 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 COL4A3Q01955 1670 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 MTCL1Q9Y4B5 1905 aaKnown RBP13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 MIF4GDA9UHW6 222 aaKnown RBP13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 TRAPPC3O43617 180 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 CEP104O60308 925 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 ATP2C2O75185 946 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 GJB6O95452 261 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 GPD2P43304 727 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 AARSP49588 968 aaKnown RBP eCLIP13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 BCAT1P54687 386 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 STARD6P59095 220 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 CREMQ03060 361 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 BST2Q10589 180 aaKnown RBP13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 ZNF268Q14587 947 aaPredicted RBP13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 CFAP221Q4G0U5 840 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 TEX35Q5T0J7 233 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 MAML2Q8IZL2 1156 aaPredicted RBP13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 ANKRD52Q8NB46 1076 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 C3orf20Q8ND61 904 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 SPATA18Q8TC71 538 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 COG1Q8WTW3 980 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 UBXN4Q92575 508 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 GOLGA1Q92805 767 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 SUSD3Q96L08 255 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 MCEEQ96PE7 176 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 CPXM1Q96SM3 734 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 ABCB6Q9NP58 842 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 IP6K2Q9UHH9 426 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 CYTH4Q9UIA0 394 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 LCMT1Q9UIC8 334 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 FBXW11Q9UKB1 542 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 CDH9Q9ULB4 789 aa13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 ZFP37Q9Y6Q3 630 aaPredicted RBP13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 V9GYY5 206 aaPredicted RBP13.82□□□□□ -0.2
HLA-DMB-258ENST00000418107 DOCK6Q96HP0 2047 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 PIK3R2O00459 728 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 GABRDO14764 452 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 ERBB2P04626 1255 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 KRT3P12035 628 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 SLC1A1P43005 524 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 TSPY1Q01534 308 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 PDE4CQ08493 712 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 PUM1Q14671 1186 aaKnown RBP eCLIP13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 OVOS1Q6IE37 1185 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 TTC30AQ86WT1 665 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 SUMF1Q8NBK3 374 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 HES6Q96HZ4 224 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 SHDQ96IW2 340 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 RNF14Q9UBS8 474 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 CDH7Q9ULB5 785 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms