RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ZNF276Q8N554 614 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 WBP2Q969T9 261 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 TMEM176AQ96HP8 235 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 UBXN6Q9BZV1 441 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 CISHQ9NSE2 258 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 COQ4Q9Y3A0 265 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 CACNA1AO00555 2505 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 DCHS1Q96JQ0 3298 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 A0A1W2PQH9 124 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 MED19A0JLT2 244 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 SLC30A4O14863 429 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 CYP26A1O43174 497 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 ZNF806P0C7X5 589 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 RARGP13631 454 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 PLA2G4AP47712 749 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 ELF2Q15723 593 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 ANO4Q32M45 955 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 USP39Q53GS9 565 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 DCAF17Q5H9S7 520 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 CCDC186Q7Z3E2 898 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 TADA2BQ86TJ2 420 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 C11orf74Q86VG3 221 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 RASSF3Q86WH2 238 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 ETFBKMTQ8IXQ9 262 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 ELOA2Q8IYF1 753 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 SLC4A11Q8NBS3 891 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 TATDN2Q93075 761 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 NMUR1Q9HB89 426 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 OSER1Q9NX31 292 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 DEC1Q9P2X7 70 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 DNMT3LQ9UJW3 386 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 USP3Q9Y6I4 520 aa18.53■□□□□ 0.56
PDLIM2-208ENST00000416159 TBC1D3BA6NDS4 549 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 ANTXRLA6NF34 631 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 TULP3O75386 442 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 ALDH1A2O94788 518 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 KLF8O95600 359 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 RALAP11233 206 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 TIE1P35590 1138 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 KIR2DL1P43626 348 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 RAD23BP54727 409 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 KDSRQ06136 332 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 MESP2Q0VG99 397 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 STIM1Q13586 685 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 EOGTQ5NDL2 527 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 ARHGAP17Q68EM7 881 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 TMEM25Q86YD3 366 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 PHTF2Q8N3S3 785 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 ALLCQ8N6M5 410 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 NAT16Q8N8M0 369 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 IL17RCQ8NAC3 791 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 TXNDC5Q8NBS9 432 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 KCNV2Q8TDN2 545 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 ERCC4Q92889 916 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 CNOT6LQ96LI5 555 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 DUSP15Q9H1R2 295 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 ARMCX3Q9UH62 379 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 NAGPAQ9UK23 515 aa18.52■□□□□ 0.56
PDLIM2-208ENST00000416159 FRYLO94915 3013 aa18.52■□□□□ 0.55
PDLIM2-208ENST00000416159 DMXL1Q9Y485 3027 aa18.52■□□□□ 0.55
PDLIM2-208ENST00000416159 PSMA7O14818 248 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 GREM1O60565 184 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 PPP1R2P41236 205 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 SLC8A3P57103 927 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 YWHAEP62258 255 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 CBWD6Q4V339 395 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 CBWD3Q5JTY5 395 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 CBWD5Q5RIA9 395 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 C10orf120Q5SQS8 335 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 EMC10Q5UCC4 262 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 ANO7Q6IWH7 933 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 TMEM92Q6UXU6 159 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 SCD5Q86SK9 330 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 SFTPA1Q8IWL2 248 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 C12orf50Q8NA57 414 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 DHTKD1Q96HY7 919 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 XPO6Q96QU8 1125 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 CDK5RAP1Q96SZ6 601 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 METTL14Q9HCE5 456 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 POLMQ9NP87 494 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 CLIC5Q9NZA1 410 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 WDR35Q9P2L0 1181 aa18.51■□□□□ 0.55
PDLIM2-208ENST00000416159 ABCA7Q8IZY2 2146 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 DCDC2BA2VCK2 349 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 TRIM49BA6NDI0 452 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 SGK1O00141 431 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 DCLK1O15075 740 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 CHRM1P11229 460 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 GBP1P32455 592 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 AASDHQ4L235 1098 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 PLA2G2CQ5R387 149 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 TRMT11Q7Z4G4 463 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 ARHGAP18Q8N392 663 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 ANKRD52Q8NB46 1076 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 ARID3AQ99856 593 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 TPSD1Q9BZJ3 242 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 VPS45Q9NRW7 570 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms