RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TRIM60Q495X7 471 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 TIGD5Q53EQ6 642 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 LLGL2Q6P1M3 1020 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 RHOT1Q8IXI2 618 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 COLGALT2Q8IYK4 626 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 CCDC89Q8N998 374 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 ATL2Q8NHH9 583 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 RAB3IPQ96QF0 476 aaPredicted RBP12.08□□□□□ -0.48
RFFL-205ENST00000415395 ACBD6Q9BR61 282 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 BAIAP2L1Q9UHR4 511 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 LGALS13Q9UHV8 139 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 ANAPC5Q9UJX4 755 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 FNDC1Q4ZHG4 1894 aaPredicted RBP12.07□□□□□ -0.48
RFFL-205ENST00000415395 TMEM120BA0PK00 339 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 E5RJQ4 531 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 XPO1O14980 1071 aaKnown RBP12.07□□□□□ -0.48
RFFL-205ENST00000415395 CDH16O75309 829 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 OAS1P00973 400 aaKnown RBP12.07□□□□□ -0.48
RFFL-205ENST00000415395 GBP2P32456 591 aaPredicted RBP12.07□□□□□ -0.48
RFFL-205ENST00000415395 STX2P32856 288 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 SLCO1A2P46721 670 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 IFNAR2P48551 515 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
RFFL-205ENST00000415395 RPL7AP62424 266 aaKnown RBP12.07□□□□□ -0.48
RFFL-205ENST00000415395 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 SIX1Q15475 284 aaPredicted RBP12.07□□□□□ -0.48
RFFL-205ENST00000415395 CD300LGQ6UXG3 332 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 ZNF365Q70YC5 407 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 ARCQ7LC44 396 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 SPATA21Q7Z572 469 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 EXOC3L1Q86VI1 746 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 RELL1Q8IUW5 271 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 ABI1Q8IZP0 508 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 SLC2A14Q8TDB8 520 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 FBF1Q8TES7 1133 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 CKAP2Q8WWK9 683 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 FAM193BQ96PV7 902 aaPredicted RBP12.07□□□□□ -0.48
RFFL-205ENST00000415395 SYT15Q9BQS2 421 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 PAAF1Q9BRP4 392 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 DUSP16Q9BY84 665 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 MRPL9Q9BYD2 267 aaKnown RBP12.07□□□□□ -0.48
RFFL-205ENST00000415395 C11orf49Q9H6J7 331 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 KCNK9Q9NPC2 374 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 TBC1D13Q9NVG8 400 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 KLHL14Q9P2G3 628 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 LRFN2Q9ULH4 789 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 LTBP2Q14767 1821 aa12.07□□□□□ -0.48
RFFL-205ENST00000415395 CLTBP09497 229 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 CCDC130P13994 396 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 NQO1P15559 274 aaKnown RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 PTPRDP23468 1912 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 COPS2P61201 443 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 IL9RQ01113 521 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 RNASELQ05823 741 aaKnown RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 MAPRE1Q15691 268 aaKnown RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 AADACL2Q6P093 401 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 PMF1Q6P1K2 205 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 POLNQ7Z5Q5 900 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 NPAS4Q8IUM7 802 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 KATNAL2Q8IYT4 538 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 CRIPAKQ8N1N5 446 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 KCTD13Q8WZ19 329 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 N4BP2L2Q92802 583 aaPredicted RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 MAGEB18Q96M61 343 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 TTC25Q96NG3 672 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 ANKRD27Q96NW4 1050 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 RXFP1Q9HBX9 757 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 BATF3Q9NR55 127 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 METTL5Q9NRN9 209 aaKnown RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 TCP11X1B4DZS4 312 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 GOLGA8SH3BPF8 625 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 HCRTO43612 131 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 DDHD2O94830 711 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 GJB6O95452 261 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 ACSL3O95573 720 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 ABHD2P08910 425 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 NPR3P17342 541 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 DESP17661 470 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 IBSPP21815 317 aaPredicted RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 PSMA2P25787 234 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 ADORA2BP29275 332 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 RFC1P35251 1148 aaPredicted RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 ADCY8P40145 1251 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 ATP11AP98196 1134 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 SLC6A3Q01959 620 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 ZNF252P-AS1Q0IIN9 211 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 FAM133BQ5BKY9 247 aaKnown RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 FAM102AQ5T9C2 384 aaPredicted RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 NUGGCQ68CJ6 796 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 OR6B2Q6IFH4 312 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 CNKSR3Q6P9H4 555 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 RHBDF2Q6PJF5 856 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 OLFML1Q6UWY5 402 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 FAM183BPQ6ZVS7 135 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 THEM5Q8N1Q8 247 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 UHMK1Q8TAS1 419 aaKnown RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 CASD1Q96PB1 797 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms