RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 CDCA3Q99618 268 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-204ENST00000412913 DDX23Q9BUQ8 820 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-204ENST00000412913 NSUN3Q9H649 340 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-204ENST00000412913 TLE6Q9H808 572 aa11.06□□□□□ -0.64
SMARCAL1-204ENST00000412913 POPDC2Q9HBU9 364 aa11.06□□□□□ -0.64
SMARCAL1-204ENST00000412913 NAALADL1Q9UQQ1 740 aa11.06□□□□□ -0.64
SMARCAL1-204ENST00000412913 CCL16O15467 120 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 LINC01565O15544 149 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 FTCDO95954 541 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 LRG1P02750 347 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 F11P03951 625 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 TCF4P15884 667 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 MAN1A1P33908 653 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 MATKP42679 507 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 ZNF143P52747 638 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 EPHA5P54756 1037 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 YWHAZP63104 245 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 SLC25A11Q02978 314 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 EIF4EBP2Q13542 120 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 MESDQ14696 234 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 VEPH1Q14D04 833 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 SH3PXD2AQ5TCZ1 1133 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 SNX30Q5VWJ9 437 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 SYPL2Q5VXT5 272 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 BSPRYQ5W0U4 402 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 MSANTD2Q6P1R3 559 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 DCUN1D2Q6PH85 259 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 CYP4V2Q6ZWL3 525 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 DNAJB7Q7Z6W7 309 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 NT5DC3Q86UY8 548 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 TRIM58Q8NG06 486 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 CENPIQ92674 756 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 CD101Q93033 1021 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 CALR3Q96L12 384 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 HCFC1R1Q9NWW0 138 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 ZDHHC7Q9NXF8 308 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 LMCD1Q9NZU5 365 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 MAGED2Q9UNF1 606 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 HYOU1Q9Y4L1 999 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 ASB3Q9Y575 518 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 MTCH2Q9Y6C9 303 aa11.05□□□□□ -0.64
SMARCAL1-204ENST00000412913 TMEM110-MUSTN1A8MSY1 372 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 KIF5CO60282 957 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 ABCB7O75027 752 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 LRCH4O75427 683 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 OAS1P00973 400 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 HNRNPA1P09651 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 POU3F3P20264 500 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 COMTP21964 271 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 PSMA2P25787 234 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 SDC4P31431 198 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 NOS2P35228 1153 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 CCR2P41597 374 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 SULT1E1P49888 294 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 ATXN1P54253 815 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 EPHB3P54753 998 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 HDAC4P56524 1084 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 TAS2R40P59535 323 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 RNASE9P60153 205 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 COL19A1Q14993 1142 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 IFI16Q16666 785 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 ZNF569Q5MCW4 686 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 TMEM184AQ6ZMB5 413 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 GAREM2Q75VX8 874 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 DAAM2Q86T65 1068 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 TAC4Q86UU9 113 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 ITIH5Q86UX2 942 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 MON1AQ86VX9 555 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 EFHBQ8N7U6 833 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 PDZD8Q8NEN9 1154 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 CMASQ8NFW8 434 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 DQX1Q8TE96 717 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 EDEM1Q92611 657 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 PGAP3Q96FM1 320 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 ALS2CR12Q96Q35 445 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 PEBP4Q96S96 227 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 TBCBQ99426 244 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 CNPY3Q9BT09 278 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 SMOC2Q9H3U7 446 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 SFXN1Q9H9B4 322 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 ABCC13Q9NSE7 274 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 CLIC5Q9NZA1 410 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 DNMT3BQ9UBC3 853 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 IP6K2Q9UHH9 426 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 PACSIN2Q9UNF0 486 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 SZT2Q5T011 3432 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 COL4A3Q01955 1670 aa11.04□□□□□ -0.64
SMARCAL1-204ENST00000412913 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
SMARCAL1-204ENST00000412913 ZNF840PA6NDX5 716 aa11.03□□□□□ -0.64
SMARCAL1-204ENST00000412913 MYO1FO00160 1098 aa11.03□□□□□ -0.64
SMARCAL1-204ENST00000412913 IRAK2O43187 625 aa11.03□□□□□ -0.64
SMARCAL1-204ENST00000412913 NCK2O43639 380 aa11.03□□□□□ -0.64
SMARCAL1-204ENST00000412913 TBX10O75333 385 aa11.03□□□□□ -0.64
SMARCAL1-204ENST00000412913 MOSPD3O75425 235 aa11.03□□□□□ -0.64
SMARCAL1-204ENST00000412913 ENDOD1O94919 500 aa11.03□□□□□ -0.64
SMARCAL1-204ENST00000412913 OLFM2O95897 454 aa11.03□□□□□ -0.64
SMARCAL1-204ENST00000412913 NCAM1P13591 858 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms