RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 KIAA0319Q5VV43 1072 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 STRADAQ7RTN6 431 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 LPPQ93052 612 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 RTP4Q96DX8 246 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 SENP8Q96LD8 212 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 VPS37BQ9H9H4 285 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 UBN1Q9NPG3 1134 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 MTMR10Q9NXD2 777 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 DDX20Q9UHI6 824 aaKnown RBP20.95■□□□□ 0.94
USP39-204ENST00000409766 ZMYND8Q9ULU4 1186 aaPredicted RBP20.95■□□□□ 0.94
USP39-204ENST00000409766 ABT1Q9ULW3 272 aaKnown RBP20.95■□□□□ 0.94
USP39-204ENST00000409766 HEY1Q9Y5J3 304 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 ACTL7BQ9Y614 415 aa20.95■□□□□ 0.94
USP39-204ENST00000409766 ANKRD65E5RJM6 399 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 BEST1O76090 585 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 SLC8A3P57103 927 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 GPX6P59796 221 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 BASP1P80723 227 aaKnown RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 ADCY1Q08828 1119 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 ADIGQ0VDE8 80 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 TADA2BQ86TJ2 420 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 ANKMY2Q8IV38 441 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 NRDE2Q9H7Z3 1164 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 AGO3Q9H9G7 860 aaKnown RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 GPBP1L1Q9HC44 474 aaPredicted RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 XPO7Q9UIA9 1087 aaKnown RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 CLUHO75153 1309 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 ATXN2Q99700 1313 aaKnown RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 ARL5CA6NH57 179 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 KIF3CO14782 793 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 BRAFP15056 766 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 CYP2F1P24903 491 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 CLCNKBP51801 687 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 CACNB2Q08289 660 aaPredicted RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 AGMOQ6ZNB7 445 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 KCTD13Q8WZ19 329 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 NDRG1Q92597 394 aaKnown RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 WDR83Q9BRX9 315 aaKnown RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 OSBPL7Q9BZF2 842 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 DHX35Q9H5Z1 703 aaKnown RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 DDX43Q9NXZ2 648 aaKnown RBP20.94■□□□□ 0.94
USP39-204ENST00000409766 AP4E1Q9UPM8 1137 aa20.94■□□□□ 0.94
USP39-204ENST00000409766 BCLAF3A2AJT9 711 aaKnown RBP20.93■□□□□ 0.94
USP39-204ENST00000409766 GPR182O15218 404 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 RPLP2P05387 115 aaKnown RBP20.93■□□□□ 0.94
USP39-204ENST00000409766 ASGR1P07306 291 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 PRKCZQ05513 592 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 SLC25A52Q3SY17 297 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 CAPN12Q6ZSI9 719 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 CLEC20AQ6ZU45 233 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 MICALCLQ6ZW33 695 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 CPLX4Q7Z7G2 160 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 DEFB106AQ8N104 65 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 CCDC185Q8N715 623 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 PYROXD1Q8WU10 500 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 MAGEB5Q9BZ81 275 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 GIT1Q9Y2X7 761 aa20.93■□□□□ 0.94
USP39-204ENST00000409766 CFAP69A5D8W1 941 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 KCNN4O15554 427 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 MRPS5P82675 430 aaKnown RBP20.92■□□□□ 0.94
USP39-204ENST00000409766 MPP2Q14168 576 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 KCNJ11Q14654 390 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 MDH1BQ5I0G3 518 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 MRPL10Q7Z7H8 261 aaKnown RBP20.92■□□□□ 0.94
USP39-204ENST00000409766 SRRM1Q8IYB3 904 aaKnown RBP20.92■□□□□ 0.94
USP39-204ENST00000409766 PDIK1LQ8N165 341 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 TMEM86AQ8N2M4 240 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 SMC1BQ8NDV3 1235 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 C3orf58Q8NDZ4 430 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 PPCSQ9HAB8 311 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 CRTAC1Q9NQ79 661 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 XPNPEP3Q9NQH7 507 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 RBL1P28749 1068 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 IFNAR2P48551 515 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 RASA2Q15283 850 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 TMED2Q15363 201 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 C6orf89Q6UWU4 347 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 ATP11CQ8NB49 1132 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 NT5C3BQ969T7 300 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 SEC16BQ96JE7 1060 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 KCTD15Q96SI1 283 aaPredicted RBP20.92■□□□□ 0.94
USP39-204ENST00000409766 KCNK9Q9NPC2 374 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 PAK5Q9P286 719 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 RABGEF1Q9UJ41 708 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 CEP350Q5VT06 3117 aa20.92■□□□□ 0.94
USP39-204ENST00000409766 RASA4BC9J798 803 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 POC1B-GALNT4F8VUJ3 575 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 RASA4O43374 803 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 DAB1O75553 588 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 MAP3K6O95382 1288 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 LHX1P48742 406 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 NDUFV1P49821 464 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 SCNN1GP51170 649 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 YWHAZP63104 245 aaKnown RBP20.91■□□□□ 0.94
USP39-204ENST00000409766 RNASELQ05823 741 aaKnown RBP20.91■□□□□ 0.94
USP39-204ENST00000409766 NR1H3Q13133 447 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 KCNA10Q16322 511 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 GKAP1Q5VSY0 366 aaPredicted RBP20.91■□□□□ 0.94
USP39-204ENST00000409766 FBXO36Q8NEA4 188 aa20.91■□□□□ 0.94
USP39-204ENST00000409766 FAM149B1Q96BN6 582 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms